|
Name : PSPTO_2673 (PSPTO_2673) Accession : NP_792480.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase family protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2968411 - 2969892 bp Length : 1482 bp Strand : - Note : similar to GP:15159016; identified by sequence similarity; putative DNA sequence : ATGAGCCTTACCCGCTTTCAGATGTGCATCGACGGCCAGTGGGTCGATGCGCTGTCCGGCAAGACCTTCGACAGCCTCAA CCCGGCACTGGCCGAACCCTGGGCGCAGTTGCCCGACGCGGGTGAGGCGGATGTCGAGCGCGCCGTGCAGGCGGCGCAAA AAGCGTTTGAAAGCCAGGAGTGGCGAGGCCTGACTGCCACCGCACGCGGCAAGTTGCTGCGCAGGCTGGGTGATCTGATC GCCGAGAACAAGGAACACCTGGCGCAACTGGAAAGCCGCGACAACGGCAAACTGATTCGCGAAACCCGTGGCCAGGTCAG TTACCTGCCAGAGTTCTTTCATTACACCGCCGGGCTGGCTGACAAACTCGAAGGCGGCACCCTGCCCCTCGACAAGCCGG ACCTGTTTGCCTACACGGTGCACGAGCCGATGGGCGTGGTTGCCGGGATCATCCCCTGGAACAGCCCGCTGTACCTGACC GCCATCAAGCTGGCACCCGCACTGGCTGCCGGCAATACCATCGTCCTCAAGCCTTCGGAACACGCGTCGGCCACCGTGCT GGAACTGGCGCGACTGGCGCTTGAAGCCGGCATTGCGCCCGGTGTGGTCAACGTTATCACTGGCTACGGACCGACCACCG GCGCAGCCCTGACCCGCCACCCGCTGGTGCGCAAGATTGCCTTCACCGGCGGCGCAGCCACGGCGCGTCATGTGGTGCGC AGCAGCGCCGAAAACTTCGCCAAACTGTCGCTGGAACTGGGCGGCAAATCACCCAATATCATTTTCGCCGACGCCGACCT GGACAGCGCCATCAATGGCGCGGTCGCTGGCATTTATGCGGCGTCCGGGCAAAGCTGCGTGTCCGGCTCCAGGCTGCTGG TGCAGGACGAGATCTACGATGAATTCGTCGAGCGTCTGGCTGAACGCGCCAGCCGTATCCGCATCGGCAACCCGCTGGAT GAAAGCACCGAAATGGGCCCGATGGCCACTGCCCAGCAGTTGGCTGTGGTGGAAGGCCTGGTGGCCGACGCGCTTGCCGA AGGTGCACGCCTGCGCCTGGGCGGCAAGCGCCCCGAACTGGACAGCAAAGGCTGGTTTTATGAGCCGACACTGTTCGAGT GCGACCACAACTCGATGAAGATCATGCAGGAAGAAGTGTTCGGCCCGGTCGCGTCTGTGATCCGCTTCAAGGACGAAGCC GAAGCGCTGGCGATCGCCAACGACTCGCAGTTCGGTCTGGCTGCCGGGATCTGGACCCGCGACCTGGGCCGCGCCCACCG GCTGGCACGGGACATTCGTTCAGGGATCATCTGGGTCAACACGTATCGCGCCGTATCGGCGATGGCGCCCATCGGTGGTT TCAAAAATAGCGGCTACGGCCGCGAGAGCGGGATAGACTCCGTGCTGGCCTACACCGAGCTGAAAACGGTGTGGATCAAC CTTTCGCAGGCGCCCATGCCTGATCCATTTGTCATGCGTTAA Protein sequence : MSLTRFQMCIDGQWVDALSGKTFDSLNPALAEPWAQLPDAGEADVERAVQAAQKAFESQEWRGLTATARGKLLRRLGDLI AENKEHLAQLESRDNGKLIRETRGQVSYLPEFFHYTAGLADKLEGGTLPLDKPDLFAYTVHEPMGVVAGIIPWNSPLYLT AIKLAPALAAGNTIVLKPSEHASATVLELARLALEAGIAPGVVNVITGYGPTTGAALTRHPLVRKIAFTGGAATARHVVR SSAENFAKLSLELGGKSPNIIFADADLDSAINGAVAGIYAASGQSCVSGSRLLVQDEIYDEFVERLAERASRIRIGNPLD ESTEMGPMATAQQLAVVEGLVADALAEGARLRLGGKRPELDSKGWFYEPTLFECDHNSMKIMQEEVFGPVASVIRFKDEA EALAIANDSQFGLAAGIWTRDLGRAHRLARDIRSGIIWVNTYRAVSAMAPIGGFKNSGYGRESGIDSVLAYTELKTVWIN LSQAPMPDPFVMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-78 | 43 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-83 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-79 | 42 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 6e-78 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-82 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-82 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-82 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 8e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPTO_2673 | NP_792480.1 | aldehyde dehydrogenase family protein | VFG0082 | Protein | 3e-79 | 42 |
