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Name : PSPTO_2604 (PSPTO_2604) Accession : NP_792413.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2892437 - 2894218 bp Length : 1782 bp Strand : - Note : Presumed to have relevance to siderophore functions due to presence in yersiniabactin biosynthesis operon.; see PMID:20190049 for expression data; similar to GP:11493180; identified by sequence similarity; putative DNA sequence : ATGACGCGCAATCATGATGCTGCCGACAGGCCCACAACCCGCCCCCTCAACCATACCGGGCTGCTCAGACTGGCACCGGG CATGTTTGCCCTGGCGATCGGTTGCGCTGTGGTGTCAGCGCTGCTGAGCCTTGTACCGCTGTGGTGCATCTACAAAATCG CGCAGGTCTTGCTGAGCCCCTTGCCTGATGCACATGCGGCATTGGTCTGGGGCCTCTGGGCGTTGGCGGCGGTGCTGCTG CGCTGGTTGATCATGACCCTCAGCCATGTGAGCGCACATCTGGCAGCCTTCGAGCTGCTGCGTCAGTTGCGCAGCCGGAT TGCCCGGCATTTGGGCGAAGTGCCACTGAGCTTTTTCAGCCAGCACAGCAGTGCCGACCTGCGTCGCACAATAAGTGACG ATGTCGGTGCGCTTGAAGGGTTCTTCGCTCACTCGCTGCCCGACTCTATTTCAGCCGCAATCATGCCGCCGCTGACCCTG GCGGTGCTGTTCATCATTGACTGGCGGCTGGCACTGGCCTGTATCGCCCCGCTGCCGCTGGCGTTTCTTGCACAGATGCT GATGGTGAAGGGCTCGGCCGAGCGCATGGCGCAGTGGCAAGGCATGCAGCAACGTATTTCACAAAGTTTCAGCGAGTATC TGCAAGGCATTCAGGTGGTGAAAAGCTTCGGCCTGACCAGCCTGCGCTTCGGCTCGCTGAGCAACGACATACGCGGTGCG GCAGAGTGGGTGGCCGGGTTTGCCCGCAAGAGTTCGCTGTTCTGGGTGGTGTTCTCAGGGCTGCTGAGCGCCAGCCTGAT GATCGTTGCACCGTTGGGCGCCTGGTTGCTGCTCAACGGCACTGTCACGCTGGAAACCCTGCTGTTGTTTCTGCTGCTGG CACCTGCCGCCCTGATGCCCTTGTTGCGCCTGACCTACATGCTCGGCGATCAGGTGCAGCGTAATGCAGCGCTGGCGAGG ATCAACAGCGTGCTGCTCAGCCTGCCGCTGAGCGACAACGCCGATGCGCAAAGCCCTGATGCCCCGCTGGACCTGTGCCT GGAAAACGTCTGCCACGGCTATGGCGAAAGACAGGCGCTGGATCACGTCAGTTTCACTGCCCAGGCAGGTCAGTTGACCG CCCTGGTCGGCCCCAGCGGTTCGGGCAAAAGTACCTTGGCGCAACTGGTCAGCCGGTTGTTCGACGCCGACAGCGGCAGC ATCACCCTGGGTGGCACCGAGCTGCGCGACTGGCCACTGCAGGCCCTGCTTGATCGGGTCGCGACGGTGTTTCAGCACGT GCACCTGTTTGACGGATCGGTGCTCGACAACCTGCGCCTGGCAAACCCCGACGCCGATCAGGCGAGTGTCGAAGCCGCAG CACGTGCCGCGTGCGCCCATGATTTTATCGAACGCCTGCCGCAGGGTTATCACACAGCCATTGGCGAAGCCGGCGCGCAA CTGTCCGGCGGCGAGCGCCAGCGCCTGTCTATAGCCCGCGCCTTGCTGAAAAACGCCCCCGTGCTGATCCTCGATGAAGC CACGGCCTACGCCGACAGCGAAAACGAGGTGCTGATCCAGCAGGCGCTGGCCAATCTGTGCCGGGGCCGAACCGTCCTGA TGATTGCCCATCGCCTGCACACCGTCATCGACGCGCAACGCATCGTCGTCCTCGATCAGGGCCGGGTGCTCGGCATCGGC CGCCATGAGCAGTTGCTCGAAAACTGCGAGCTGTATCAACAACTCTGGCAAGACCACACCCGCATTCGCCAATGGCAACT GAGCAGTGGAGAACCCGCATGA Protein sequence : MTRNHDAADRPTTRPLNHTGLLRLAPGMFALAIGCAVVSALLSLVPLWCIYKIAQVLLSPLPDAHAALVWGLWALAAVLL RWLIMTLSHVSAHLAAFELLRQLRSRIARHLGEVPLSFFSQHSSADLRRTISDDVGALEGFFAHSLPDSISAAIMPPLTL AVLFIIDWRLALACIAPLPLAFLAQMLMVKGSAERMAQWQGMQQRISQSFSEYLQGIQVVKSFGLTSLRFGSLSNDIRGA AEWVAGFARKSSLFWVVFSGLLSASLMIVAPLGAWLLLNGTVTLETLLLFLLLAPAALMPLLRLTYMLGDQVQRNAALAR INSVLLSLPLSDNADAQSPDAPLDLCLENVCHGYGERQALDHVSFTAQAGQLTALVGPSGSGKSTLAQLVSRLFDADSGS ITLGGTELRDWPLQALLDRVATVFQHVHLFDGSVLDNLRLANPDADQASVEAAARAACAHDFIERLPQGYHTAIGEAGAQ LSGGERQRLSIARALLKNAPVLILDEATAYADSENEVLIQQALANLCRGRTVLMIAHRLHTVIDAQRIVVLDQGRVLGIG RHEQLLENCELYQQLWQDHTRIRQWQLSSGEPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nrpA | YP_002152321.1 | siderophore ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 7e-110 | 45 |
