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Name : PSPTO_2603 (PSPTO_2603) Accession : NP_792412.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2890695 - 2892440 bp Length : 1746 bp Strand : - Note : Presumed to have relevance to siderophore functions due to presence in yersiniabactin biosynthesis operon; see PMID:20190049 for expression data; similar to GP:11493181; identified by sequence similarity; putative DNA sequence : ATGATTTCCAGTCTGATGCGCGCGGGCGAACGCCTCGCAGGGCAACGCGATCCACGCCTGAGCCAAGGCTTGCGCCTGGC AGTCCTTGAAGGTCTGTTGAGCGCAGCGCCGTACCTGCTGCTGTACTGGCTGCTGGCGAGCCTGTTCGACAATACGCTGC AGGGCTGGAGCCTGATCTGGCTGGCGCTGGGCATGCTTGCCTGTTTGATCGGGCGAATTGTCGTCGGCGCCCTCGGCACA CCGCTGATATTCACCGGTGCCTACGCAATGATGGCAAATGCCCGCCTGCGTCTGGTCGACCATTTACAAAAGCTGCCGCT CGGCTGGTTCGCGACTGCCCACAGCGGTGAAATCAGCGCTCAAGTCACCAGTGATCTGGCCATGGTCGAGCACCTGTGGT CGCACTTTCTCGGTGTGTTCGCGCTGTCGCTGGCTGAACTGACGTTTATTCTGCTTCTGCTGTTCTGGCTCGAACCCCTC CTCGCCTGCACGGTGTTGGTCACGTTGCCGCTTGCAGCGCTGGCAATCTACGTGGCAATCCGCAAAACGCTGCTGCACGC CGACCCTATGCTCGCGACCAGCAACCGCACTCAGGCAGCGCTGCAGGAATACATTCAGGGCATTGCAGTGATCCGCAGCT TCGGCCGTTTCGGCAGTGCCCTGAAGCGCTTGAATCGAGCGCTGGACGAGCAACACCGGGCCATGGTCAGTATCGAACTG AAACCGGCAGCATGGGTCGCCCTGTTCGGTCTGGTCATCGAGGCCGGTTTCATCCTCATGGTGCTGCTGGGCTGCAACCT GCTGCTCAACGGACAGATGAGCATTCAGCACCTGATGATCTTCACCGTGCTGGCCTGGCCGCTGTATCGCAAGGCCATCG ATCTGGGGTTTTCCATTCTGTTGCTGCGCTTCGGCCACCGCGCGCTGTCGCGCACCGAGCAGTTGCTCGACCAGCAACCG ATGCCCGAGCCGGCGCAGCCACGCAGCCCCGGACATTTCGATATCGACCTCAAAGAGGTGTGTTTTAGCTATGCCGGACG CGAAGCGCCGGTTATCGAAGGGCTTTCGTGCCATCTGGCCGCTGGCACCCTGACTGCACTGGTCGGCCCCAGCGGCGCGG GGAAAAGCACCCTGGCGCAGCTGGTCGCCCGCCTGTGGGACATCGACAGCGGTCAGTTACAGATTGGCGGCATCGAGGCG CGAGACATCGGCAGTGATCACCTGCAAAAGCACATATCGATGGTCTTTCAGGACGTCACCCTGTTCTCCGGCACGGTGCT CGACAACCTGCTGGTCGGCAAGCCCGACGCCAGCGAGCAGGAGGTCATTCACGCTGCACGTCTGGCCCATGCTCACACGT TCATTGAGGCGCTGCCCGACGGCTATGCCACGCGCATCGGCGAAGGCGGCGGCTGGCTGTCGGGCGGTGAACGGCAACGC CTTTCCATCGCCCGTGCGCTGCTGAAAAACAGCCCGATCCTGCTGCTCGACGAAGCCACCTCAAGCGTCGATCCGTCTTC GGAAGCCGCCATTCAGCGGGGCCTTGATGCGCTGGTACGTGATCGCACGGTACTGGTCATCGCCCATCGCCTGCACAACA TCCAGCACGCCGACCAGATTCTGGTCATGGATCGCGGACGCATCGTGGAACAGGGCCGCCACGATGAACTGTTGGCGCAG CAAGGGCTGTACGCCCGCTTGTGGAACCGCCAGAGCCAGGCTCGGAACTGGCATCTGCACACCTGA Protein sequence : MISSLMRAGERLAGQRDPRLSQGLRLAVLEGLLSAAPYLLLYWLLASLFDNTLQGWSLIWLALGMLACLIGRIVVGALGT PLIFTGAYAMMANARLRLVDHLQKLPLGWFATAHSGEISAQVTSDLAMVEHLWSHFLGVFALSLAELTFILLLLFWLEPL LACTVLVTLPLAALAIYVAIRKTLLHADPMLATSNRTQAALQEYIQGIAVIRSFGRFGSALKRLNRALDEQHRAMVSIEL KPAAWVALFGLVIEAGFILMVLLGCNLLLNGQMSIQHLMIFTVLAWPLYRKAIDLGFSILLLRFGHRALSRTEQLLDQQP MPEPAQPRSPGHFDIDLKEVCFSYAGREAPVIEGLSCHLAAGTLTALVGPSGAGKSTLAQLVARLWDIDSGQLQIGGIEA RDIGSDHLQKHISMVFQDVTLFSGTVLDNLLVGKPDASEQEVIHAARLAHAHTFIEALPDGYATRIGEGGGWLSGGERQR LSIARALLKNSPILLLDEATSSVDPSSEAAIQRGLDALVRDRTVLVIAHRLHNIQHADQILVMDRGRIVEQGRHDELLAQ QGLYARLWNRQSQARNWHLHT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nrpB | YP_002152322.1 | siderophore ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 6e-110 | 47 |
