|
Name : irp3 (PSPTO_2599) Accession : NP_792408.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : yersiniabactin synthetase, thiazolinyl reductase component Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG4693 EC number : - Position : 2872651 - 2873733 bp Length : 1083 bp Strand : - Note : This enzyme reduces the carbon-nitrogen bond of the second of three thiazoline rings of the siderophore yersiniabactin. Most probably this reduction takes place while an intermediate of the biosynthesis is still bound to irp2, the non-ribosomal peptide sy DNA sequence : ATGAAAAGGCCATTGAAGGTGCTGGTTGTCGGGGCCAAGTTCGGGGAGCTGTACCTCAACAGTTTTCTGCTCGAACAGCC CGGTTTGCAGCTGGCCGGGCTGCTGGCCAACGGCAGCCCGCGCGCCAGAGCGCTGGCCAACGCGTTCGGCATCGCGCTGT ATACCGATATCGAGCAACTGCCGGACGACCTGGACATTGCCTGCGTGGTGGTGCGCTCGGCAGTGGTCGGCGGGGCCGGT GGGCAATTGACCGAGAGCCTGCTGCGCCGAGGGTTGCATGTCATTCAAGAGCACCCGGTGCACCCGGATGAATTGGTTCG GCATCAGCAACTGGCCACCCGGATGGGCTGCCAGTACATCGTCAACAGCTTCTACCCGCACACCGAGGCGGGCCGCTGCT GGGCCGGCACGGCGCAACGCATCTCGCGGCTGCTGGAGGGCCGCAAGCCCAACCTGGCACAGCTGACCACCAGTCGCCAG TTGCTCTACTCGGGCCTGGACCTGCTGTTTCAGGCGCTCGGCTGCGACCTGGCCAGGCAAGTCAGCGTCAGCCTGCTCGA CGGCGACGATGACTTTCATACCCTGTCGCTGAACCTGCCGGACAGCCGCGTACTGCTGCGCCTGCAACGCTGGATGGCGG CCGACGATCCGGACCTGCACAGCCTGGTCATGCACCAGCTCAATCTGGCGTGGCCCAGTGGCTACCTTTCGCTGGACGCC ACTTACGGCCCGGTCAACTGGACACCTGCGCTGCACGCCGAGGCCCATGACGACGATCGTCAGACCCTCTACACCAGCAA CGCCGACTATCTGCAGCACGCAACCGCGATGCCGCTGCACCCGGCAGCCAGTCACTGGCGTAGCGCCCATGAAATCGAAG GGCCTGCCGGTGTCGGCTGGCTGCTGCAACAACTGCTGGCTGTCCTGCAAGGCCGGCCCCGCGCCGACGGCCTGCAGGCT GATTATCAGTTGGCCGTGGCCAGGCTCTGGCAAGACATCCTGCGCTGCGCCGGACCCGCCGAGCAGCGCATGGCCAGCGC GCCGCTTTTCATTGATGCCGCGCAATTGCGGGCGGAGGGTTGA Protein sequence : MKRPLKVLVVGAKFGELYLNSFLLEQPGLQLAGLLANGSPRARALANAFGIALYTDIEQLPDDLDIACVVVRSAVVGGAG GQLTESLLRRGLHVIQEHPVHPDELVRHQQLATRMGCQYIVNSFYPHTEAGRCWAGTAQRISRLLEGRKPNLAQLTTSRQ LLYSGLDLLFQALGCDLARQVSVSLLDGDDDFHTLSLNLPDSRVLLRLQRWMAADDPDLHSLVMHQLNLAWPSGYLSLDA TYGPVNWTPALHAEAHDDDRQTLYTSNADYLQHATAMPLHPAASHWRSAHEIEGPAGVGWLLQQLLAVLQGRPRADGLQA DYQLAVARLWQDILRCAGPAEQRMASAPLFIDAAQLRAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtU | CAA21392.1 | - | Virulence | HPI | Protein | 9e-61 | 50 |
| irp3 | CAA73128.1 | Irp3 protein | Virulence | HPI | Protein | 4e-62 | 50 |
| irp3 | YP_002346900.1 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 9e-61 | 50 |
| ybtU | NP_669708.2 | thiazolinyl-S-HMWP1 reductase | Virulence | HPI | Protein | 9e-61 | 50 |
| ybtU | NP_993005.2 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 9e-61 | 50 |
| ybtU | YP_070122.1 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 9e-61 | 50 |
| irp3 | YP_001006817.1 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 5e-62 | 50 |
| ybtU | YP_853077.1 | yersiniabactin biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 1e-60 | 50 |
| nrpU | YP_002152319.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 8e-65 | 45 |
