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Name : irp4 (PSPTO_2598) Accession : NP_792407.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : yersiniabactin synthetase, thioesterase component Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG3208 EC number : - Position : 2871864 - 2872679 bp Length : 816 bp Strand : - Note : Possibly involved in the release of an intermediate product see PMID:20190049 for expression data; similar to pyochelin, since the terminal yersiniabactin synthetase has its own thioesterase domain.; see PMID:20190049 for expression data; similar to GP:38 DNA sequence : ATGCCGCGCAATTGCGGGCGGAGGGTTGATCGCATGGATGTGGGTATGGATGCAGGTATGTTGCGCCCTTTTCTGCGCGC CGATCAGTGCCAGCCGCATGTGCTGCTGTGCCCGTTTGCCGGGGCCAGCGGTGGCGCCTTTCATCACTGGCGCGAGCTCG ACGAGCCGGGCCTGAACCTGACGCTGGCGATCTATCCGGGGCGTGACCAGCGCATGCACGAGCCCTGCCTGCGTCAGGTT CAGCCACTCGCCGACAGCCTTGCCGCAGACATTCAGGCCATGCCGGATGCACAACGCCGCCCCCTGATACTGGCCGGGCA CAGCATGGGCGCGCAGGTCGCCTTCGAAACCTGTCTGTTGCTGGAACAGGCCGGTACGCCACCCGCAGGGCTGGTGTTAT CGGCCTGCCATGCCCCCCACCTGACTGGTAGGCGCCTGCTCAGCCATCTGGATGACCGGCGCTTCATCGAACAACTGGTT GCCATTGGCGGTGTCAGCGACGCCTTGCTGGCGAATCCGGACCTGCTGGCGTTGTTCATGCCCTTGTTGCGGGCCGATTT CCAAGCCACGGAAAGCTATTACCGCCCGCTGCAGGCAGATCGTCAGCGCTTGCAGACACCGACGCTGTTGCTGCACGGCA GTCACGACCCCGAAGCCGATCAGGAGGAAGTCAGCGCCTGGCGGCAATGGCTGTGCGGCGACTGTCGGCAACAGGTCATG GCCGGCGACCACTTCTACCTGACGCAACGCCCCAGAGCCTTCGCTGCACAGGTCCTGAACTTCATCGAACAGAGCATCAG CCCTTTCCATCCGTAA Protein sequence : MPRNCGRRVDRMDVGMDAGMLRPFLRADQCQPHVLLCPFAGASGGAFHHWRELDEPGLNLTLAIYPGRDQRMHEPCLRQV QPLADSLAADIQAMPDAQRRPLILAGHSMGAQVAFETCLLLEQAGTPPAGLVLSACHAPHLTGRRLLSHLDDRRFIEQLV AIGGVSDALLANPDLLALFMPLLRADFQATESYYRPLQADRQRLQTPTLLLHGSHDPEADQEEVSAWRQWLCGDCRQQVM AGDHFYLTQRPRAFAAQVLNFIEQSISPFHP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtT | NP_669709.2 | yersiniabactin thioesterase | Virulence | HPI | Protein | 1e-44 | 50 |
| ybtT | YP_070121.1 | yersiniabactin biosynthetic protein YbtT | Virulence | HPI | Protein | 1e-44 | 50 |
| ybtT | YP_853078.1 | yersiniabactin biosynthetic protein YbtT | Virulence | PAI IV APEC-O1 | Protein | 1e-44 | 50 |
| ybtT | AAA93463.1 | yersiniabactin biosynthesis thioesterase-like protein | Virulence | HPI | Protein | 1e-44 | 50 |
| irp4 | YP_002346899.1 | yersiniabactin biosynthetic protein YbtT | Virulence | HPI | Protein | 2e-44 | 50 |
| ybtT | NP_993004.1 | yersiniabactin biosynthetic protein YbtT | Virulence | HPI | Protein | 2e-44 | 50 |
| ybtT | CAA21393.1 | - | Virulence | HPI | Protein | 2e-44 | 50 |
| nrpT | YP_002152320.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 3e-47 | 49 |
| irp4 | YP_001006818.1 | yersiniabactin biosynthetic protein YbtT | Virulence | HPI | Protein | 4e-46 | 49 |
| irp4 | CAA73129.1 | Irp4 protein | Virulence | HPI | Protein | 3e-46 | 49 |
