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Name : amt-2 (PSPTO_2586) Accession : NP_792395.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 2856588 - 2857913 bp Length : 1326 bp Strand : + Note : identified by match to PFAM protein family HMM PF00909 DNA sequence : ATGGTCAATCGTCTACACGGCAAATCCCTACTGGCTTTACTGACTCTCAGTGCCTTGGCGCCCTGGGCGCAGGCGGCCGA AACGCCAGTCCTGAACACCGGCAGCACCGCATGGATGATCACCGCAGCAGTCCTGGTGCTGTTCATGTGCCTTCCGGGGC TGGCACTGTTCTACGGCGGACTGGTGCGGGCCAAAAACATGCTCTCGCTGTTCACGCAGTGTTTTGGCATCGCCGGTGTA GTCGGCGTGCTATGGGTGATCTACGGCTACAGCATGGTGGTTGACACCAGCAACATGGTCGAAGGGCAGGTAACGTTCAA CAGCTTCGTCGGTGGCCTGAGTCGCGCCTTTCTGGCGGGCATGACCCCCGATAGCCTGGTCGGTGAAATCCCGGAAGGCG TGTTCGTGACCTTCCAGATGACCTTCGCCATCATCACGCCTGCACTGATTGCCGGAGCCTTTGCCGAGCGCATGAAATTC TCTGCCGCGCTGCTGTTCATGGCGCTCTGGTTCACCTTGGTGTATGCGCCGGTCGCGCACATGGTCTGGGGCGGGGCGGG TGCGTTGATGCACAACTGGGGCGTGCTGGATTTTGCCGGTGGCACTGCGGTGCACATCAATGCCGGTGTTGCAGCATTGG CAGCCTGTCTGGTGCTGGGCAAACGCAAGGGTTATCAGAACACACCCATGCCGGCTCATAATCTGAGCCTGACCATGGCC GGCGCGGCGATGCTCTGGGTCGGCTGGTTCGGCTTCAACATCGGCTCTGGCGGCGGCCTGAGCGGCACTTCCGGCATCGT CATGCTTAACACCCAAGTGGGTGCCTGCGCCGGGATTCTCGGCTGGATGTTCACCGAATGGTTCAAGGTCGGCAAACCGA GTGCACTGGGCCTGGCCAGTGGTGCGCTGGCCGGTCTGGTCGGCATCACGCCTGCCTGTGCTTACGTCGGCGTCGGCGGC GCGTTGGCGATTGGTGTCCTGTGCGGAGTGTTCTGCTACCTGAGCGTGACCGTCCTGAAAAAACGCCTGGGCTACGACGA CAGCCTCGATGTCTTCGGCCTGCACGGCATCGGCGGCATGATCGGCGCGGTACTCACCGGCGTCTTCTGCGTACCGGCAC TGGGCGGGCTGGTGCCAGAGGTGACCATGGGTGCGCAAGTCATTGCACAGGTCAAAGGCGTGCTCTTCACCACCGTGTAT TGCTTTGCGGTCAGCTGGATCATCCTCAAAGCAGTCAACGCACTGATCGGCCTGCGGGCTCACGAGTCAGTAGAAGAGAT GGGCCTGGACCTGGCCGAGCATAATGAGCGGGCTTACAACCACTGA Protein sequence : MVNRLHGKSLLALLTLSALAPWAQAAETPVLNTGSTAWMITAAVLVLFMCLPGLALFYGGLVRAKNMLSLFTQCFGIAGV VGVLWVIYGYSMVVDTSNMVEGQVTFNSFVGGLSRAFLAGMTPDSLVGEIPEGVFVTFQMTFAIITPALIAGAFAERMKF SAALLFMALWFTLVYAPVAHMVWGGAGALMHNWGVLDFAGGTAVHINAGVAALAACLVLGKRKGYQNTPMPAHNLSLTMA GAAMLWVGWFGFNIGSGGGLSGTSGIVMLNTQVGACAGILGWMFTEWFKVGKPSALGLASGALAGLVGITPACAYVGVGG ALAIGVLCGVFCYLSVTVLKKRLGYDDSLDVFGLHGIGGMIGAVLTGVFCVPALGGLVPEVTMGAQVIAQVKGVLFTTVY CFAVSWIILKAVNALIGLRAHESVEEMGLDLAEHNERAYNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 4e-61 | 50 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 4e-61 | 50 |
