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Name : PSPTO_2548 (PSPTO_2548) Accession : NP_792358.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2812959 - 2815562 bp Length : 2604 bp Strand : + Note : similar to SP:P03815; identified by sequence similarity; putative DNA sequence : ATGATCGATGTAGACCTGCAGCAACTCGTTAAAGCCCTGGATGCCCCCACACGCAACGAACTCGAGGGGGCCGCAGGGCG TTGCGTGTCCAGAGGCAGTAGCCAGATTCTCGTTGAGGATATGTTGCCTGGCTTGCTGGAACGACCGGATGGAATGCTGA TGCGTGCGCTATCGGACGCAGATGTCTCGACTGCCGAATTCGCAGGCCTGATCCTTGTGCCTGTTGAGCATAGCGTCGAC CGAACCCCGGTATTCGCCGCCGAACTTGTTCAATGGTTTCAGGACGCACTTCTTATTGCCACGCTGGATTTGGGGCAGAG TCACATTGATCAGGCTGCGCTGATTCTTGCGCTGCTGCGCAACCCGTTGCGTTATGCCGATCGTCCCTACCAGCCACTCC TGGCGAAAATCAACATTGAACGCTTTCGGGACTATGTGCTTTCCAGGCAGGCATCCGGCACAGCAAGGCAAGCGATACAT CAATCTGATTCACTGCTCGAACGCTTCACTCATAACCTGACGCAGCAGGCCCGAGAGGGGTCGCTTGATCCGGTGCTGTG CCGGGACGACTGCCTGCGGCAGATGGTCGACATACTGGCTCGCCGCCGCAAGAACAATCCGATTGTGGTGGGCGAGGCGG GTGTTGGCAAAACTGCAATTGTCGAAGGGCTGGCGCTGAGAATCGTTCGGGGTGAAGTTCCTGACCTATTGAAAGATGTC GAACTGTTGTCTCTTGATATGGGCCTGCTCCAGGCAGGTGCCAGTATCAAAGGCGAGTTCGAGCGTCGCTTGAAGGGCGT CATTGACGAGGTCAAGTCTTCGCCGGGCTCTTTCATTCTGTTCATTGATGAAGCCCACACTCTGATCGGCGCAGGTGCAA ATGCTGGAGGCTCAGACGCTGCCAACATTTTGAAGCCAGCACTGGCACGTGGCGAACTGCGCACTATCGCGGCAACCACC TGGGCCGAATATCGACAATACTTTGAGAAGGATCCGGCGCTTGCACGTCGCTTTCAGCCGGTTCGCGTGCTTGAGCCCAC GGTCGAACAAGCCGTCACCATCCTGCGCGGGCTCGCTCCACTGTATGAACAGAGCCATGGCGTCTATCTACGCGACGATG CGGTGGTGGCCGCTGCCCGGCTGTCGGCACGCTATATATCCGGTCGGCAGCTGCCAGACAAGGCAATCGATCTGCTTGAT ACAGCCTGCGCCCGAGTGCAAATCAGTCTGGTCGCGGTGCCTGAGCGCCTTGAGCATCTTCGCAGCGAGATGGTTCAGCA GCAGAGACACCTTGAGGCCGTGCAGCGTGATGCCGATGCAGGCTTGTCGGTGGATGACAAGGTGTTGAGTACACTGGCAT CCAGTGTGTCGCGTATCCGCAAGGAAGCCATCGTGCTTGAAGACGCCTGGCTTGATCAGCGAAAAACCGCCAGGCGGGTG CTTGATCTGCGTCAGCAACTTGCCCACCGAAAAATACAGCAGAACGCTCTGACCACTCTGGACAGTGATTGTCAGGCCAC CCAGGCGCTGGAGTCCGAATTGGCTCAGGCTCAGCAGACGATCCTCAGCACGCAGCTGAAAGACCGTCTGGTGAGCTTCG AAGTATGTCCCAGGTTAGTCGCGCAAGTGGTCAATGCCTGGACCGGCATACCGCTGTCGCAGCTGGTCCAGGAACACAGC CTTTCCATTGCAGATTTTTCGTCTGACCTGCGTCTGCGCATTCGGGGACAGGAGCAGGCTGTGCAGGTTCTTGAAAGGGC AGTGAAGGCGTCGGCGGCAGGTTTGAATGCGCCGAATGCACCTACTGGCGTGTTCCTTCTGGTGGGTCCCAGTGGCGTGG GCAAGACCGAAACCGCTATCGCTCTGGCTGATCTTTTATATGGCGGCGAGCGCTTTCTTACGACGATCAATATGTCCGAG TTTCAGGAAAAGCATACGGTCTCACGCTTGATCGGCGCGCCTGCGGGCTACGTTGGCTATGGCGAGGGAGGCATGTTGAC CGATGCCGTTCGACAGAAGCCGTACTCGGTGATTCTGCTTGATGAAGTCGAGAAGGCTGACCCGGAAGTAATGAACCTGT TCTATCAGATATTCGACAAGGGTGTCGCCAACGACGGCGAAGGCCGGGAAATCAACTTCCGCAACACGCTTATTCTGATG ACTTCCAATCTGGGCGGTGATCTGATCCATGCGAGCTGCCGAGAGGGTGAGCGTCCGGATGCCGACGAGCTGGCTATGAG AATAAAGCCGCTACTCACCGCGCATTTCAAGCCTGCTTTACTGGCCAGGATGCGAGTAGTGCCTTATTACCCCGTTACGG GGGTGGTGCTCCATGAATTGATCGAGTTGAAACTGAGCAGGCTTGGGGAAAGGCTCGAATGCCGCGGGCTGACCTTCAGT TATTCTCCGGATCTGACTCGCTATCTGCTTGAATGCTGCACCCAAAGCGACAGCGGTGCGAGGTTGATTGATCACGTGCT GGAGTCACGCGTGACGCCGCTCATCGCCGACCGACTGCTGAGTGCCGCGAGCAGCGGTGACAGCGTCTCCAGGGCGCACG CAACACTTGACGCTTCTGGCGGCATTGTCTGTGAGTTCGAATAA Protein sequence : MIDVDLQQLVKALDAPTRNELEGAAGRCVSRGSSQILVEDMLPGLLERPDGMLMRALSDADVSTAEFAGLILVPVEHSVD RTPVFAAELVQWFQDALLIATLDLGQSHIDQAALILALLRNPLRYADRPYQPLLAKINIERFRDYVLSRQASGTARQAIH QSDSLLERFTHNLTQQAREGSLDPVLCRDDCLRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIVRGEVPDLLKDV ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKSSPGSFILFIDEAHTLIGAGANAGGSDAANILKPALARGELRTIAATT WAEYRQYFEKDPALARRFQPVRVLEPTVEQAVTILRGLAPLYEQSHGVYLRDDAVVAAARLSARYISGRQLPDKAIDLLD TACARVQISLVAVPERLEHLRSEMVQQQRHLEAVQRDADAGLSVDDKVLSTLASSVSRIRKEAIVLEDAWLDQRKTARRV LDLRQQLAHRKIQQNALTTLDSDCQATQALESELAQAQQTILSTQLKDRLVSFEVCPRLVAQVVNAWTGIPLSQLVQEHS LSIADFSSDLRLRIRGQEQAVQVLERAVKASAAGLNAPNAPTGVFLLVGPSGVGKTETAIALADLLYGGERFLTTINMSE FQEKHTVSRLIGAPAGYVGYGEGGMLTDAVRQKPYSVILLDEVEKADPEVMNLFYQIFDKGVANDGEGREINFRNTLILM TSNLGGDLIHASCREGERPDADELAMRIKPLLTAHFKPALLARMRVVPYYPVTGVVLHELIELKLSRLGERLECRGLTFS YSPDLTRYLLECCTQSDSGARLIDHVLESRVTPLIADRLLSAASSGDSVSRAHATLDASGGIVCEFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 8e-153 | 45 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-153 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPTO_2548 | NP_792358.1 | clpB protein | VFG2084 | Protein | 3e-150 | 46 |
| PSPTO_2548 | NP_792358.1 | clpB protein | VFG2076 | Protein | 2e-149 | 42 |
