Gene Information

Name : PSPTO_2543 (PSPTO_2543)
Accession : NP_792353.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2807665 - 2808165 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCAGAGAAGGCTCTGTTGCGCCCAAAGAACGGATCAACGTCACATTCAAACCAGCCATCGGGAGCGCGCAGGAAGA
AATAGAGCTACCGCTGAAACTTCTGGTTCTCGGCGACTTTACACAGCGGTTCGATGAACGAAAGCTCGAAGACCGTAAGT
CGATCAGCATCGACAAGAATAATTTCGATGACTTCATGGCCAAGCAAGAGCTGGAACTTGCGTTGATCGTGCCTAATCGT
TTGCAGGCTGACAGTGAGGTTGATGACTTGACTGTCAGCATTAAAGTGGCCTCGATGAAAGATTTCAACCCAGCCAGCCT
CGTGGAGCAAATTCCCGAACTGAAAAAACTGATGGAACTTCGTAATGCGTTGATGTCGTTAAAAGGACCCTTGGGTAATA
CGCCTGCTTTTCGCAAGGCTATCGAGAAGGTCATTTCTGACAATGAATCACGTGGGAAGGTGCTAGACGAGCTCGGCCTC
GGTGTAGTAGCGCAGCAGTGA

Protein sequence : 
MAREGSVAPKERINVTFKPAIGSAQEEIELPLKLLVLGDFTQRFDERKLEDRKSISIDKNNFDDFMAKQELELALIVPNR
LQADSEVDDLTVSIKVASMKDFNPASLVEQIPELKKLMELRNALMSLKGPLGNTPAFRKAIEKVISDNESRGKVLDELGL
GVVAQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_2543 NP_792353.1 hypothetical protein VFG2092 Protein 6e-38 51
PSPTO_2543 NP_792353.1 hypothetical protein VFG2474 Protein 8e-39 49