Gene Information

Name : PSPTO_0264 (PSPTO_0264)
Accession : NP_790115.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 287061 - 288644 bp
Length : 1584 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGACAACCTGATTGAAATTCGCGACCTGCGGGTCGCCTTCAACGGCCACGAAGTGGTGCATGGCATCAGCCTTGA
TATCCGCCGTGGCGAATGCCTGGCGCTGGTGGGCGAATCCGGTTCCGGCAAATCAGTGACCGCGCATTCGATTCTGCGCT
TGCTGCCCCCGAAAAACGTCAGTACCCAGGGTTCGATTCGCTATGACGGGCTGGATCTGGTCACGGCCAGCGACAAGCAA
TTGCGCAGTCTGCGCGGCAACCGGGTGGCGATGATTTTTCAGGAGCCCATGAGCTCGCTGAACCCGCTGCACACGGTCGA
AAAGCAAATTGGCGAAATCCTCGTCACGCACAAGGGCCTGAAGGGCAAGGCCGCGCTGAGCCGGACGCTGGAGCTGCTGG
AGCTGGTCGGCATTCGCGAACCGTTGTTGCGGCTCAAGGCTTATCCGCATCAACTGTCGGGCGGGCAACGCCAGCGGGTC
ATGATCGCCATGGCGCTGGCCAACGAACCTGACTTGCTGATCGCTGACGAGCCGACCACCGCGCTGGATGTGACGGTGCA
GGTGAAGATTCTCGAGTTGCTTAAATCGCTGCAACAGCGGCTGAACATGTCGCTGCTGCTGATCAGCCACGACCTCAATC
TGGTCCGGCGCATCGCTCAGCGAGTCTGTGTGATGCGTGAGGGCGAGATCGTCGAGCAGGCTGATTGCCAAGCCCTGTTC
GATAACCCGCAGCACCCTTACAGCCGTCTGCTGATCAATGCCGAGCCGGATGGCGAACCGGTGCCGTCCACGCACAGCAA
TACGCTGCTGTCGGTGCAGGACCTGAAGGTCTGGTTCCCGCTGGGCAAAGCCTGGTTCCAGCGCGAGCAGCAGTACGTGA
AGGCGGTGGACGGGGTCAGTTTCGAGCTGCTCAAGGGCAAGACGCTGGGCATTGTCGGCGAGTCCGGTTCGGGCAAATCG
ACGCTGGGCCAGGCGATTTTGCGGCTGGTGGATTCAGAGGGCAGCATCCGCTTTGGCACCAAGGAACTGAGCTTGCACAG
TCAGCACCTGATGCGCCCGTTGCGTCGCCAGCTGCAGGTGGTGTTTCAGGACCCGTTCGGCAGCCTGAGCCCGCGCATGA
CCGTAGAGCAGATCATCGCCGAGGGCTTGGTGACGCATAAAATCGGCACGCCCAAAGAACGTGAGCAGACGGTGATTCGG
GTGTTGCAGGAAGTGGGGCTCGATCCGGCGACGCGGCATCGTTACCCGCATGAGTTTTCCGGTGGCCAGCGCCAGCGCAT
TTCCATCGCCAGGGCATTGGTGCTTGAACCGGATCTGATCCTGCTGGACGAGCCGACGTCAGCCCTCGACCGCACCGTGC
AGAAGCAGATCGTCGCACTGTTGCGCGACCTGCAAATCCGTCATGGCCTGACGTACCTGTTCATCAGCCATGACCTGGCG
GTGGTGCATGCGCTGGCCCATGACCTGATCGTGATCAAGGACGGCAAAGTGGTCGAACAAGGCCCGTCCCGCGAGATCTT
CGCCGCGCCGCAGCAGGCCTACACACAGGAACTGCTGCGCTCGTCGGGGCTAGTGTTTGCCTGA

Protein sequence :
MQDNLIEIRDLRVAFNGHEVVHGISLDIRRGECLALVGESGSGKSVTAHSILRLLPPKNVSTQGSIRYDGLDLVTASDKQ
LRSLRGNRVAMIFQEPMSSLNPLHTVEKQIGEILVTHKGLKGKAALSRTLELLELVGIREPLLRLKAYPHQLSGGQRQRV
MIAMALANEPDLLIADEPTTALDVTVQVKILELLKSLQQRLNMSLLLISHDLNLVRRIAQRVCVMREGEIVEQADCQALF
DNPQHPYSRLLINAEPDGEPVPSTHSNTLLSVQDLKVWFPLGKAWFQREQQYVKAVDGVSFELLKGKTLGIVGESGSGKS
TLGQAILRLVDSEGSIRFGTKELSLHSQHLMRPLRRQLQVVFQDPFGSLSPRMTVEQIIAEGLVTHKIGTPKEREQTVIR
VLQEVGLDPATRHRYPHEFSGGQRQRISIARALVLEPDLILLDEPTSALDRTVQKQIVALLRDLQIRHGLTYLFISHDLA
VVHALAHDLIVIKDGKVVEQGPSREIFAAPQQAYTQELLRSSGLVFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-102 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-86 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-86 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-86 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-86 43