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Name : gabD-1 (PSPTO_0257) Accession : NP_790108.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 279109 - 280566 bp Length : 1458 bp Strand : + Note : - DNA sequence : ATGCTCAAGAATCAGTTGAAAGACCCCAGCCTGCTGGTGGACCGCGCCTACGTCGATGGGCAATGGATCAGCGCTGATGA TGGTGCAACGCTGGCCATCAGCGACCCGGCGACCGGCGAAGTGATCGCGCAGGTTCCGGCCTTGCAAGGCGCTGAAACCC GCCGCGCCATCGAGGCCGCTGATCGTGCCTGGCCTGCCTGGCGCGCGCGTCCTGCCGCCGAGCGTGCGGCGCTACTGGAG CGCTGGCATCAGGCGATGCTCGACAACGTCGAAGACCTCGCGCTGATCATGACCCTTGAGCAGGGCAAGCCGCTGAACGA GTCGCGTGGCGAGATCCGCTATGGCGCAAGCTTCGTCAAATGGTTCGCTGAAGAAGCGCGCCGCTCGTACGGTGAAACCA TTCCCACGCCCAGCGCTGATCGTCGTTTGATGACGCTCAAACAGCCGGTCGGTGTCTGCGCCGCGATCACCCCGTGGAAT TTCCCCAACGCCATGATCACCCGCAAATGCGCGCCAGCTCTGGCTGCAGGCTGCACGATCATCGTCAAACCGTCGGACCT CACGCCGCTGTCGGCGCTGGCGCTGGCAGTGCTGGCCGAGCGCGCGGGCATTCCTGTTGGTGTGTTCAGCGTCGTCACCG GCATGCCGACCGCCATCGGCGAAGAGCTGACCGGCAACCCGGTGGTGCGCAAGATTTCCTTCACCGGCTCCACGCCGATC GGCCGTCTGCTGATGCGCCAGAGCGCCGAACACATCAAGCGCCTGAGCCTGGAACTGGGGGGCAACGCGCCGTTCATCGT GTTTGACGACGCTGATCTGGAGCAGGCTGTGGCCGGCATTATGCTCAGCAAATTCCGCAACGCCGGGCAAACGTGCGTGT GCGCCAACCGGATTCTGGTGCAGAGCGGCATTTACGACCGTTTCGCTGCGCGGCTGGTGGAAGAAGTCGCCAAACTCAAG GTCGGCAACGGTCTGGAAGAGGGCGTGACCATCGGCCCGTTGATTAATCCGGCAGCGGTCAGCAAAATTGCCCGGCACAT CGACGATGCGCTGAGCCAGGGCGCGAAGTTGCTGTACGGCGGGTTGCCCAACGGTGACGGCCAGTTCGTCCAGCCAACGG TATTGGGTGATACCCATGCGGGCATGCTGCTGGCCAACGAAGAAACCTTCGGCCCGGTTGCCCCGCTGATGCGTTTCACC GACGAAGCCGAGGCCCTCGCACTGGCCAACGCAACGCCCTACGGCCTTGCCGCTTACTACTTCACCCAGGACCTGCGTCG CTCATGGCGTTTCGGCGAAGCGCTGGAATTCGGCATGGTCGGCCTCAACACCGGCATCATCTCCATGGAAATCGCCCCCT TCGGCGGCATCAAACAATCCGGCCTGGGCCGCGAAGGCTCCAGCTACGGCCTGGATGAATACCTGGAAGTGAAGGCGTTT CATGTGGGTGGGTTGTAG Protein sequence : MLKNQLKDPSLLVDRAYVDGQWISADDGATLAISDPATGEVIAQVPALQGAETRRAIEAADRAWPAWRARPAAERAALLE RWHQAMLDNVEDLALIMTLEQGKPLNESRGEIRYGASFVKWFAEEARRSYGETIPTPSADRRLMTLKQPVGVCAAITPWN FPNAMITRKCAPALAAGCTIIVKPSDLTPLSALALAVLAERAGIPVGVFSVVTGMPTAIGEELTGNPVVRKISFTGSTPI GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVAGIMLSKFRNAGQTCVCANRILVQSGIYDRFAARLVEEVAKLK VGNGLEEGVTIGPLINPAAVSKIARHIDDALSQGAKLLYGGLPNGDGQFVQPTVLGDTHAGMLLANEETFGPVAPLMRFT DEAEALALANATPYGLAAYYFTQDLRRSWRFGEALEFGMVGLNTGIISMEIAPFGGIKQSGLGREGSSYGLDEYLEVKAF HVGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-133 | 62 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-80 | 42 |
