Gene Information

Name : PSPTO_2319 (PSPTO_2319)
Accession : NP_792138.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2569753 - 2570166 bp
Length : 414 bp
Strand : -
Note : see PMID:20190049 for expression data; similar to SP:P04130; identified by sequence similarity; putative

DNA sequence : 
ATGATCGATTGGGCACGCGCAGGAGATGTTGTTCATGTGCATTCGATTGACCGTCTAGCACGCTCTATGGCTGACCTCCT
CAAGATCGTTGCCGACTTCAACGCAAAGGGCGTACATGTCCACTTCCATAAAGAATCTATGGTGTTCACTGGTGACGACT
CACCCATGCAGAAACTCATGTTGAACATGATGGGCAGCTTTGCCCAATTTGAAAGAGAGGTGATGAAGGAGCGCCAGCGG
GAAGGTATCGCGAAGGCCAAGGAGAAAGGAGTTTACAAAGGTCGAGTGAAGACCGTGGATGATGCTGCGATCCTGGCCCT
GCTGAGTGCTGGTAAGTCTGTCCGTGTTGTCGCCGCTGAACTCGGCGTCAACCCCTCCACAGTTCAACGTGCAAAAAATG
CCTCAAAAGGTTGA

Protein sequence : 
MIDWARAGDVVHVHSIDRLARSMADLLKIVADFNAKGVHVHFHKESMVFTGDDSPMQKLMLNMMGSFAQFEREVMKERQR
EGIAKAKEKGVYKGRVKTVDDAAILALLSAGKSVRVVAAELGVNPSTVQRAKNASKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 4e-28 49
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-28 49
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-28 49
ABTW07_3879 YP_005797127.1 hypothetical protein Not tested AbaR4e Protein 2e-23 48
ABTW07_3894 YP_005797142.1 hypothetical protein Not tested AbaR4e Protein 2e-23 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_2319 NP_792138.1 resolvase VFG1030 Protein 1e-28 49