Gene Information

Name : PSPTO_2267 (PSPTO_2267)
Accession : NP_792086.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2511730 - 2512413 bp
Length : 684 bp
Strand : -
Note : see PMID:20190049 for expression data

DNA sequence : 
ATGAGTGAAAGTATTCTCAGTGCCCAAAACCTCAGCAAAGTGGTCCCCAGCACCGAAGGTGACCTTACCATCCTGCACGA
ACTCTCCCTGGAACTAAACAAGGGCGACACGCTGGCCATCGTCGGTGCCTCCGGCTCGGGCAAATCTACGCTGCTCGGGT
TGCTCGCCGGGCTCGACCTGCCCAGCGCCGGTTCCGTCATCCTGTCAGGCCGCAACCTCAGCGAGCTGGATGAAGACCAG
CGCGCCAGAGTGCGCGCCGAGCACGTCGGGTTTGTCTTTCAGTCATTCCAGTTGCTCGACAGCCTGAATGCACTGGAAAA
CGTCATGCTGCCGATGGAGCTCGAAGGCCGCAAGGACGCCCGCGAAAAAGCCCGCGACCTGCTGGAGCGCGTGGGGTTGG
GCAAGCGCCTGACCCACACACCACGCCAGTTGTCCGGAGGCGAACAGCAACGCGTGGCGATTGCCCGCGCTTTCGCCGCC
GATCCGCACGTTTTGTTTGCCGACGAACCTACCGGCAACCTGGACAGTCACACCGGCGAGCGCATCAGCGACCTGCTGTT
CGAACTGAACAAGGAACGCAACACCACGCTGGTGCTGGTCACCCACGATGAGCGCCTCGCCCATCGCTGCCGCCGTCTGA
TCCGTCTTGAAGGGGGCCGCCTGGTCGCCCCGCTGGAGCCTTGA

Protein sequence : 
MSESILSAQNLSKVVPSTEGDLTILHELSLELNKGDTLAIVGASGSGKSTLLGLLAGLDLPSAGSVILSGRNLSELDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPMELEGRKDAREKARDLLERVGLGKRLTHTPRQLSGGEQQRVAIARAFAA
DPHVLFADEPTGNLDSHTGERISDLLFELNKERNTTLVLVTHDERLAHRCRRLIRLEGGRLVAPLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-22 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_2267 NP_792086.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-28 46
PSPTO_2267 NP_792086.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-29 45