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Name : kdpB (PSPTO_2243) Accession : NP_792064.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 2483607 - 2485685 bp Length : 2079 bp Strand : + Note : similar to GP:14524424, and GP:2772548; identified by sequence similarity; putative DNA sequence : ATGAGCACTACTGAAGTTTCAAGAAATGCTGCTGCAAAAGCCGCTGATCCACAGGCCGTCAACGAATCAGCGAAAACCGG CATCGCCGCCCTGTGGCGTCCGGCGCTGGTGCAGGCCTTCGTCAAGCTCGACCCCCGCCAGCTCAAGCGTTCGCCGGTCA TGCTGGTGGTGGAACTGACTGCCATTCTGACCACCGTGCTGTGTGTCATCCCCGACCCGCAGGTGCCGACTTCGGTCTGC GTGCAGATTGCCCTGTGGCTGTGGTTCACGGTGTTGTTCGCCAACTTTGCCGAAGCACTGGCTGAAGGCCGTGGCAAGGC GCGCGCTGACAGCCTCAAGGCCGGTAGCGAAGGGCTCAAGGCGCGCATCCGTGACGAAAACGGCAGCCTGCGCACGATCA ATGCCAGCGAGTTGCGCAAGGGCGATGTGGTGCGCGTCGAAATCGGCGAAATGATTCCCGGTGACGGCGAAGTCATCGAA GGCATTGCAGCCGTCAACGAAGCGGCGATTACCGGTGAATCCGCGCCGGTGATTCGCGAATCCGGCGGCGACCGCTCGGC GGTTACCGGCAACACCCGGCTGGTGTCCGACTGGCTGCTGATCCGCATCAGCAGCAACCCCGGCGAATCGACGCTGGACC GCATGATCGCGCTGGTCGAAGGCGCCAAACGTCAGAAAACCCCCAACGAAGTGGCGTTGGATATCCTGCTGATCGGCCTG ACGCTGATCTTCCTGTTGGTGGTCATTACCTTGCAGCCGTTCGCCCATTTCGCCGGTGGCAGCCTGCCGCTGGTGTTTCT GGTGGCGCTGCTGGTGACGCTGATCCCCACCACCATCGGCGGCCTGCTGTCGGCCATCGGCATCGCCGGTATGGACCGTC TGGTGCGCCTCAACGTGATCGCCAAGTCCGGGCGTGCCGTGGAAGCCGCAGGCGATGTGCACGTGCTGTTGCTGGACAAG ACCGGCACCATCACGTTCGGCAACCGCCGTTGCGCTGCCGTCTACGCAGCACCTGGCGTGACCCCCAAAGAGCTGGGCGA GGGCGCGTTGCTGGCGTCGCTGGCCGACGACACGGCGGAAGGCAAATCCATCGTCGAGTTCTTGCGCGAGCAGCACCCGA TGAACGAGCCGACCCTGGGGTCGGTGACGGCCGTGCCGTTCAGTGCTGACACACGGCTGTCCGGCGTGGACTATCAAGGC CATGTGTACCGCAAGGGCGCGGTGGATTCGCTGCTGGCGTTCATCAACATGCAGCGCAGCGAGCTGCCGCCGGCACTGGC ACGCGAAGTCGACAAGATCGCCAAGACCGGTGGTACGCCGTTGCTGGTTTGCGCCAACGGTCGGCTGCTGGGCGCCATCC ACCTCAAGGATGTGGTCAAGCCGGGCATTCGTGAGCGCTTTGAAGAACTGCGCAAACTGGGCATTCGGACCGTCATGGTG ACCGGCGACAACCCGCTGACCGCCGCGGCAATTGCTGCCGAAGCGGGCGTTGATGATGTGCTGGCAGAAGCCACGCCGGA GAAGAAGCTGGAGCGGATTCGTCAGGAGCAGGGCGAAGGCCGACTGGTGGCGATGTGCGGCGACGGTGCCAACGATGCGC CTGCGCTGGCCCAGGCCGACGTCGGCATGGCGATGAACGACGGCACCCAGGCGGCGCGCGAAGCGGCCAACATGGTCGAC CTCGACAGCGACCCCACCAAGCTGCTGGACGTGGTGCAGATCGGCAAGCAATTGCTGGTCACCCGTGGCGCGCTGACCAC GTTCTCCATTGCCAACGACGTGGCCAAATACTTCGCCGTGCTGCCGGCGCTGTTTGCCTCGATCTACCCGCAACTCGGCG TGCTCAACGTCATGCAGCTGGCCAGCCCGCAGAGCGCGATTCTCTCGGCCATCGTCTTCAACGCGCTGATCATCGTCGTG CTGATCCCGCTGGCCCTGCGCGGCGTGCGTGTGCAGGCGGCCAGTGCGGCTCATCTGCTGCGTCGCAACCTGTTGATCTA CGGCCTGGGCGGCATCGTGGTGCCGTTTATCGGTATCAAGCTGATTGACATGTTGCTGGTCGGTCTCGGCCTTGTGTGA Protein sequence : MSTTEVSRNAAAKAADPQAVNESAKTGIAALWRPALVQAFVKLDPRQLKRSPVMLVVELTAILTTVLCVIPDPQVPTSVC VQIALWLWFTVLFANFAEALAEGRGKARADSLKAGSEGLKARIRDENGSLRTINASELRKGDVVRVEIGEMIPGDGEVIE GIAAVNEAAITGESAPVIRESGGDRSAVTGNTRLVSDWLLIRISSNPGESTLDRMIALVEGAKRQKTPNEVALDILLIGL TLIFLLVVITLQPFAHFAGGSLPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLDK TGTITFGNRRCAAVYAAPGVTPKELGEGALLASLADDTAEGKSIVEFLREQHPMNEPTLGSVTAVPFSADTRLSGVDYQG HVYRKGAVDSLLAFINMQRSELPPALAREVDKIAKTGGTPLLVCANGRLLGAIHLKDVVKPGIRERFEELRKLGIRTVMV TGDNPLTAAAIAAEAGVDDVLAEATPEKKLERIRQEQGEGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVD LDSDPTKLLDVVQIGKQLLVTRGALTTFSIANDVAKYFAVLPALFASIYPQLGVLNVMQLASPQSAILSAIVFNALIIVV LIPLALRGVRVQAASAAHLLRRNLLIYGLGGIVVPFIGIKLIDMLLVGLGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-154 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-155 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-131 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-130 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-130 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-130 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-130 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-130 | 54 |
