|
Name : kdpA (PSPTO_2242) Accession : NP_792063.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : - Position : 2481902 - 2483596 bp Length : 1695 bp Strand : + Note : similar to SP:P03959; identified by sequence similarity; putative DNA sequence : ATGCACAGTTACGATTATCTGTTGATCCTGGCCTTTCTGGTCCTGCTGCTGGCGCCTGCGCCGTGGCTGGGGCGTTTCTT TTATCGGGTCATGGAAGGCGAGCGCACCTGGCTGAGCCCGGTGCTGGGGCCGGTGGAGCGGGCCTGCTACCTGATCTCCG GCGTTGACCCGAAAACCGAGCAATCCTGGAAGCAATACGCCTGGGCCTTGCTGGCGTTCAACCTGGCAGGTTTTGTCGTG TTGTTTGCGATGCTGATGCTGCAAGGCCTGCTGCCGCTCAACCCGCAGCAGCTGCCGGGCATGGAGTGGTCGCTGGCGTT CAACACGGCGATGAGCTTTGTCACCAACACCAACTGGCAGGCCTACAGCGGCGAAGCGTCGCTCAGCTACCTGAGCCAGA TGGTCGGCCTGACCGTGCAGAACTTCGTCAGCGCTGCGACTGGCCTGGCCGTGCTGGTCGCGCTGTGTCGCGGCATCAGC CGTCGTTCGTCGCACAGCCTGGGTAACTTCTGGGCCGACATGACCCGCGCCACGCTTTACGCGCTGCTACCGATCAGCAT CGTGCTGGCGGTGTTTCTGGTCTGGCAGGGCGTGCCGCAGAACTTCGCCCATTACATCGACGCTTTGACGCTGCAAGGCG CGGATCAAAGCCTGCCGATGGGGCCTGCTGCCAGCCAGATATCGATCAAGCAACTGGGCACCAACGGCGGTGGCTTCTTC GGCGTCAACTCGGCGCATCCGTTCGAGAACCCGACCGCCTGGAGCAACCTGTTCGAACTGGTGTCGATCCTGCTGATCCC GGCAGCGCTGGTGTTCACCTTCGGCCACTACGTCAAGGACATGCGCCAGAGCCGCGCGATTCTCGGCTGCATGCTGGCCT TACTGTTGATCGGCGGCGCGGTGTCGTTGTGGGCCGAGTACCAGCCCAACCCGGCGCTGAATATCGCAGGCGTCGAACAG ACTGCGCCGCTGGAAGGCAAGGAAACCCGCTTCGGCACCACCGGCACGGTGCTCTGGTCCGTGGCCACCACGGCGGCGTC CAACGGTTCGGTCAACGGCATGCATGACAGCCTCAACCCGCTGGCCGGCATGGTCGCGCTGGTCAACATGATGGTCGGCG AAGTGATCTTCGGTGGCGTCGGCGTCGGCCTCAATGGCATGGTGCTCAACGTACTGATCGCTGTGTTCCTCGCCGGTCTG ATGATTGGCCGCACCCCGGAATACCTGGGCAAGAAGCTTCAAGCGCAAGAGGTCCGGCTGCTGGTCGCGACCTTGCTGGT GATGCCTGTCGGCGTGCTGGTGCTGGGCGCGATTGCCGCCAGTCTGCCTGGCCCGGCAGGTGCGATCAGCAACCCCGGCC CGCATGGTTTCAGCCAGTTGCTGTACGCCTACACCTCGGCCACGGCCAACAACGGCTCGGCGTTCGGCGGTTTCAGCGCC AACACCGTGTTCCACAACCTGATGCTCAGCCTGGCGATCTTCATTGGCCGCTTCGGTTACATCCTGCCGGTGCTGGCACT GGCTGGCAGCCTGGCCATGAAGAAAACCGCGCCTCAGGGCCAGAACAGCTTCCCGACCCACGGCCTGCTGTTTGTCACCC TGCTGACTGTCACCATTTTGCTGGTGGGTGGCTTGACCTTCCTGCCGACCCTGGCACTGGGGCCGATTGCCGAACACCTG AGCCTGGGTTTCTGA Protein sequence : MHSYDYLLILAFLVLLLAPAPWLGRFFYRVMEGERTWLSPVLGPVERACYLISGVDPKTEQSWKQYAWALLAFNLAGFVV LFAMLMLQGLLPLNPQQLPGMEWSLAFNTAMSFVTNTNWQAYSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGIS RRSSHSLGNFWADMTRATLYALLPISIVLAVFLVWQGVPQNFAHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGAVSLWAEYQPNPALNIAGVEQ TAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNPLAGMVALVNMMVGEVIFGGVGVGLNGMVLNVLIAVFLAGL MIGRTPEYLGKKLQAQEVRLLVATLLVMPVGVLVLGAIAASLPGPAGAISNPGPHGFSQLLYAYTSATANNGSAFGGFSA NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKTAPQGQNSFPTHGLLFVTLLTVTILLVGGLTFLPTLALGPIAEHL SLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 2e-76 | 48 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 2e-76 | 48 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 4e-60 | 42 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 4e-60 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 3e-60 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 4e-60 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 4e-60 | 42 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 3e-60 | 42 |
