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Name : amt-1 (PSPTO_0218) Accession : NP_790069.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 240728 - 242065 bp Length : 1338 bp Strand : + Note : see PMID:20190049 for expression data; similar to SP:P37905; identified by sequence similarity; putative DNA sequence : ATGACTCTGCGTCAATTCGCAGGGCTCGGTGCCCTGTTGTCCCTCGCAATACCTGGTCTTGCCCTGGCGGCTGACCCAGT GGCCGAGCCGGTGCTGAACTCTGGCGACACCGCATGGATGCTGACCGCGACCGCTCTGGTCCTGTTCATGACCATTCCCG GTCTCGCGCTGTTCTACGGCGGCATGGTCCGTTCAAAAAACATCCTGTCCGTGATGATGCAGTGTTTCGCCATCACCGGC CTGATCAGCATCCTGTGGGTCGTTTACGGTTACAGCATCGCGTTTGACACAACCGGTATGGAAGCTGGCGTCGTCAACTT CAATTCCTTCTTTGGCGGTATGGGTAAAGCGTTCCTGGCGGGTATCACGCCTGCAAGCCTTACCGGTCCTGCTGCATTGT TCCCTGAGGCGGTGTTCGTCACCTTTCAGATGACCTTTGCGATCATCACTCCAGCCCTGATCGTCGGTGCTTTCGCAGAA CGCATGAAGTTCTCCGCGATGCTGATTTTCATGGGTATCTGGTTCACGCTGGTCTACGCGCCAATTGCCCATATGGTCTG GGGCGGCGTCGGTGGCTTGATGTGGGACTGGGGCGTTCTGGACTTCGCAGGTGGCACCGTGGTGCACATCAACGCCGGTG TAGCCGGTCTGGTGGCTTGCCTGGTACTGGGCAAGCGCAAAGGCTTCCCGACCACCCCGATGGCTCCGCACAATCTGGGT TACACCCTGATCGGCGCAGCGATGCTCTGGGTTGGCTGGTTCGGTTTCAACGCCGGTTCCGCCGCTGCGGCCAACGGCAC TGCCGGTATGGCGATGCTGGTGACGCAAATCGCTACCGCTGCCGCCGCGCTGGGCTGGATGTTCGCCGAGTGGCTGACGC ACGGTAAGCCAAGTGCGCTGGGCATCGCTTCGGGTGTGGTTGCCGGTCTGGTTGCCATCACCCCGGCGGCCGGTACAGTT GGCCCGATGGGCGCGCTGATCATCGGTCTGGCGGCAGGCGTGATCTGCTTCTTCTGCGCCACCAGCCTCAAGCGCAAGCT TGGCTACGATGACTCCCTGGATGCGTTCGGCGTTCACGGTATCGGCGGTATCGTCGGCGCGATCCTGACCGGTGTGTTCG CAGCACCTGCACTGGGCGGCTTCGGCACGGTGACTGACATCGGTGCTCAAGTCTGGATTCAGTTCAAGGGCGTCGCGTTC ACCGTCGTCTACACCGCGATCGTGACCTTCATCATCCTCAAGGTACTGGATGCAGTGATGGGTCTGCGGGTTACCGACGA GGAAGAGTCTGTCGGTCTGGACCTTGCGCAACACAACGAGCGTGGCTACAACTTGTAA Protein sequence : MTLRQFAGLGALLSLAIPGLALAADPVAEPVLNSGDTAWMLTATALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITG LISILWVVYGYSIAFDTTGMEAGVVNFNSFFGGMGKAFLAGITPASLTGPAALFPEAVFVTFQMTFAIITPALIVGAFAE RMKFSAMLIFMGIWFTLVYAPIAHMVWGGVGGLMWDWGVLDFAGGTVVHINAGVAGLVACLVLGKRKGFPTTPMAPHNLG YTLIGAAMLWVGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWLTHGKPSALGIASGVVAGLVAITPAAGTV GPMGALIIGLAAGVICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPALGGFGTVTDIGAQVWIQFKGVAF TVVYTAIVTFIILKVLDAVMGLRVTDEEESVGLDLAQHNERGYNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 1e-84 | 57 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 1e-84 | 57 |
