Gene Information

Name : PSPTO_2029 (PSPTO_2029)
Accession : NP_791852.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : oxidoreductase zinc-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 2215916 - 2217076 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence :
ATGTGTCATCTGCAGATCAATATGAACGTCATAGCCACTGAGCACTCCTATCAACCACATGGATCAAACGGCATTCGCTG
GATGATCCGTTCTTGCCTGAACACCGCTCCGAGGCTTGAATCCACCCATAAACCACTGTTACGAGGCCCCGCCATGACTG
ATTTATCCAACCGCCAGTTCCTGCTCGCCAAGCGTCCTTCGGGCGCTGTACGCCGTGATGACTTCACCTATCAGCAAGTG
CCTGTCACCTCATTGGCAGACGGGCAGATTCTGGTCAGAAACAAATTCCTGTCGCTTGATCCGGCAATGCGGGGCTGGAT
GAATGACGGCAAGTCCTATATTCCGGCGGTGCAACTGGGCGAGGTGATGCGCGCGCTGGGTGTGGGCGAAGTGCTTGAAT
CGAAGAACCCGAAATTTGCCGCAGGCGATCACGTCCAGGGTGCGCTTGGCACTCAGGATTACTTTGCAGGCGAGCCGAAG
GGTTTCTATAAGGTCGATACCAGCCTTGCACCGTTGCCGCTGTACCTGTCGGCACTGGGCATGACCGGCATGACCGCCTA
CCTGGCGCTGCTGGATGTCGGTCAGCCGAAAAGCGGTGACACCGTATTGATTTCCGGCGCAGCAGGCGCGGTCGGCAGCA
TTGCCGGGCAGATTGCCAAGCTCAAGGGCTGCCGAGTGGTCGGCATCGCCGGCGGCAAGGACAAATGCAGCCTGCTGACC
AGCGAGCTGGGGTTCGATGCGGCCATCGATTACAAGTCCGAAGATGTCATGGACGCGATCAAGCGTCATTGCCCGGACGG
CGTGAACGTGTACTTCGATAACGTCGGCGGCGATATTCTCGATGCAGCACTCAGCCAGTTGGCAGTCGGTGCGCGCGTGG
TGATTTGCGGTGCCATCAGCCAGTACAACAACACCACAGCCATCAAAGGCCCGGCCAATTACATGTCATTGCTGGTCAAC
CGCGCTCGCATGGAGGGCTTCATTGTGCTGGACCACGCCGACCGCTTTGCCGAAGCAGGTCAGGTCATGGCCGGCTGGAT
CAAGGAAGGCAAGCTCAAGAGCAAGGAGCATATCGTAGAAGGCCTGGAGACATTCCCGGAGACCTTCCAGATGCTGTTCA
ATGGTGAAAACCAGGGCAAGCTGATATTGAAAGTTGAATAA

Protein sequence :
MCHLQINMNVIATEHSYQPHGSNGIRWMIRSCLNTAPRLESTHKPLLRGPAMTDLSNRQFLLAKRPSGAVRRDDFTYQQV
PVTSLADGQILVRNKFLSLDPAMRGWMNDGKSYIPAVQLGEVMRALGVGEVLESKNPKFAAGDHVQGALGTQDYFAGEPK
GFYKVDTSLAPLPLYLSALGMTGMTAYLALLDVGQPKSGDTVLISGAAGAVGSIAGQIAKLKGCRVVGIAGGKDKCSLLT
SELGFDAAIDYKSEDVMDAIKRHCPDGVNVYFDNVGGDILDAALSQLAVGARVVICGAISQYNNTTAIKGPANYMSLLVN
RARMEGFIVLDHADRFAEAGQVMAGWIKEGKLKSKEHIVEGLETFPETFQMLFNGENQGKLILKVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 6e-55 47