Gene Information

Name : PSPTO_1920 (PSPTO_1920)
Accession : NP_791743.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : DegT/DnrJ/EryC1/StrS family aminotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0399
EC number : -
Position : 2102255 - 2103373 bp
Length : 1119 bp
Strand : -
Note : see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00858

DNA sequence :
ATGAGCGCACCGATCCCCGTCACTCGTCCTCTGTTACCGCCTCTGGAGGAGTTCATTCCCTACCTTGAACACATATGGGA
AAGCCGTCAGCTCACCAACGGCGGCCCGTTTCACCAACAGCTCGAACATGAACTGGCCGAGTATCTGGGCGTGCAGCACC
TCTCGCTGTTCTCCAACGGCACCCTGGCATTGATGACCGCGATTCAGGCGCTGCGCATCAAGGGCGAAGTCATCACCACG
CCCTACTCCTTCGTCGCCACAGCGCATTCGCTGCTCTGGAACAGCCTGACACCGGTATTCGTCGACATCGACCCCGGCAC
CTACAACCTCGACCCGGACCGCATCGAAGAAGCCATCACCCCGGCGACCACGGCAATCATGCCGGTGCACTGCTACGGCA
TCCCGTGCGACGTGGATCGCATTCAGCAGATTGCCGACCGCTACGGCCTGAAGGTCATCTACGACGCCGCCCATGCGTTC
GGTGTCCAGCACCGTGGCCAGAGCCTGCTCAATCATGGCGACCTGTCGGTGCTGAGCTTCCATGCCACCAAGGTTTTCAA
TACGTTCGAGGGCGGCGCCATCATCAGTCCGGACGCCAAGACCAAGCAGCGCATCGACTACCTGAAGAATTTCGGGTTCG
CCGATGAAGTCACGGTGGTGGCACCGGGCATCAACGGCAAGATGAGCGAGATCAACGCCGCATTTGGCCTGCTGCAACTG
AAATACATCGATGAAGCGCTGCTCAAGCGCCAGCGCATCGACGAACGCTACCGTGACGTACTGGCGGCGATTCCGGGGCT
GAAAATCCTCTGGAAGACCACCGAAAAGCACAACTACTCGTATTTTCCGGTACTGGTCACCGAAGACTTCGCCATTTCCC
GCGATGACCTCTATCAGCGCTTTCGCGACCACAACATCCTTGCCCGCCGCTACTTCTACCCATTGATCTCGACGTTCCCG
ATGTACCGGGGCCTGGACTCGGCAAAACCCGATCGCCTGCAGGTTGCGACCAGCCTGTCCAGCCAGATCCTCTGCCTGCC
CATTTTCGACAGCCTGACCGATGAAGCTTTCGACAGCATCATCGATGTGATCGTCGCTGCCAGTAAAGAGAACCGCTAA

Protein sequence :
MSAPIPVTRPLLPPLEEFIPYLEHIWESRQLTNGGPFHQQLEHELAEYLGVQHLSLFSNGTLALMTAIQALRIKGEVITT
PYSFVATAHSLLWNSLTPVFVDIDPGTYNLDPDRIEEAITPATTAIMPVHCYGIPCDVDRIQQIADRYGLKVIYDAAHAF
GVQHRGQSLLNHGDLSVLSFHATKVFNTFEGGAIISPDAKTKQRIDYLKNFGFADEVTVVAPGINGKMSEINAAFGLLQL
KYIDEALLKRQRIDERYRDVLAAIPGLKILWKTTEKHNYSYFPVLVTEDFAISRDDLYQRFRDHNILARRYFYPLISTFP
MYRGLDSAKPDRLQVATSLSSQILCLPIFDSLTDEAFDSIIDVIVAASKENR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK15326.1 unknown Not tested Not named Protein 7e-122 66