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Name : PSPTO_1918 (PSPTO_1918) Accession : NP_791741.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : glycosyl transferase family protein Function : - COG functional category : R : General function prediction only COG ID : COG1216 EC number : - Position : 2097934 - 2101455 bp Length : 3522 bp Strand : - Note : see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00535 DNA sequence : ATGAGTTCTTCACGCCTGGTCAGTATTGTCATCCCCGCTTACAAACCGGCTTTCTTTGAAGCTGCACTTGCCAGTGCGCT GCGACAGAACCATGACGACATCGAGATCATCATCACCGATGACTGCCGCAACGACGGCATCAAGGACATTGTCGAAAAGC TCAGGCCGACCAGCCCTTGGCCGATTCTTTATGCAAAGAACCAAACGCCGCTGGGCGAGCCGCACAACATCGCGCAGGGC ATACGCCTGGCAAGCGGTGAGTACATCAAGTTTCTCTACGACGACGACATCCTGCTTCCCGACTGCGTGCGATTGATGTT CGATGTCCTGCACGACAGCCCCGATATCAAAGTGGTGTCCGCGACCCGAAAGAGAATCGATGCCGCTGGCGCGCTGCTGG CCGACAATCTCTACACCGTCTACCCGTTCGGCAAGAACGTTGTTCTCAACGGTCCCGAGCTGGTGTCGTTTCTGGCCCAG TACCCTATCAATTTCGTCGGCGAGCCGAGTGCCGTCATGTGTCGTCGTGAAGACCTGCTGGTATTTGGTCAGGACATCAT GTCGCTGGAGCAGGTGGTGATCTGGGGGCTGGGTGATCTGGCCATTTATGCAAAGCTCTTGCGCCAGGGCAATCTGGCGA TGCTGGCCCGCCCGCTGTCCTATTTCCGCGTGTCCGATCAGCAGAGCAGTGAGGCATTCCGAAAAGACCCGACCCTGCCC CGCGAGGGCCACGCCAATTTCACTCGCATTCCCGCAGCGCTGGGCTGGGTAAGGCCCGAGGAGCTTAACGGCAAGGTCAA GATTGCGCCCTTGTCACAACGTGACAACGTCCAGGAAATGGACTTGCTGGCCTACTTCGACAGAAGGTCCGACGCCACGG TGCGCAACACCCGTATCGCTGGCTGGCTGGGTCAGCGCAGACCGACGCCAGCCCAGCACGCCCTGCTCAACGAATACCTG CAGCAGCACAACGGTGGCCCGACGATCGCGATTGTTGTATCGGACTTCAATCAGCAACCCGAAAGCGTACTCAGCACGCT GCAAAGCCTCGCCTCGGATGCGCCGCTGCTCGACAAGCTGAAGGTGTTTGTCCTTGCCGACTACGACAGGGACCAGCAGA CACCTCTGCAAGCGCAACTGCCCTGGCGGGATGCCAGCCTGGACAACCGCGCAACCGTCATCAACGAGCTGATGCAGGAT AACGACCACGACTGGTGGATTCTGATCGACGCCGGCACAACCTTCACGCCGAGCGGCCTGTTGTGTGCGGCCATGACCCT GATCGACGCGCCACAGGCCTGTGCGGTGTTCGGCGACGAAGTGACCCTGCATGCGCAGGCCGGGGCCCACCTGGCCTTTC GCCCGGATTTCAGTCTCGACTACCTGCTGGCCTGCCCCGCTGCGACCAGCCGCAACTGGCTGTTCAACCGCGAAAAAGCC CTGGCGGTGGGCGGCTTCGACTCAAGCCACGCGCACGCCATCGAACTCGACCTGATCCTGCGCATGATCGAGGACGCGGG CTTTACCGAGTTTGTGCATTCGCCAGAGCCAATGATCATCTCGCCGTTGTGGCAAGCGCAGGACAACTACGATCAGGCGC GCACGATCCAACGGCACCTGCACGCGCGCGGCTATGCGGGTGGTCAGGTGCACGCCCTTGAGTCGGGGCATTACCGGATC GAGTACGGCCATGCCGATCAGCCGCTGGTCTCGATCCTGGTCACCTCTCAGGATCAGTTGCAGACGCTGCTGCCCTGCGT CGAAAGCATCCTGGAAAACACGACGTATCCGTTCTATGAAATTCTGATCTGCGACAACAACAGCCAGTCGGCCGAAACCA CAGAATGGCTGGCGACCATCGACTCGATGCAGTCGGAACGCATCCGTGTGCTTCGTCATGAACAGACAGTCAGCCCGTCG GCGCTGCTCAATGCTGCAGCCAGCCACGCACTGGGCGACTACCTGCTGACGCTGGACAGCCATGGGTTGATCATTCAGAA GGACTGGCTCGACCATTTGCTCAACCACGCACTGCGCCCTGAAGTAGGCGTTGTGGGGGCAAAAATCATTTCAACGGATG GCAATGTCGTCGGGGCGGGTATCATCCTGGGGCTCAATGGCACCGCCGGGGCAGTCACCGCCAGCGCGATCGCAGCGTCT GTCAGCTATGCGCAACGCCTCGAAACAGACCAGAACTACAGTGCTGTGAGCGGATCCTGCCTGATGATCCGCAAATCAGT GTATGACCAGGTGCAAGGCCTGGACGAGCACCTGTTCCCTGCCCGGTTCAATGATGTGGACCTCTGCCTGAAGGCGCGCA GCGCCGGGCATCTGGTGGTCTGGACGCCACATGCCATCGTTGCGTTGCGCCCCAATGAGGTCCAACACGACGCCGAGGCA ATGGATTTCGCGGCACGCGCCCTCTCCCACCGCTGGCTGCATTACATGGCCTGGGACCCGGCCTACAACAAGAACCTGGC GCTGACCGACAGCTTCGTCACCCAGAGCAACCAGGCGTTGAGCTGGCGGCCTTTGGTTCATCGCCCGTTGCCTGTGGTCC TCGCTCAGCCCTGCAATCACAGCGCTGCCGGCAATCGCATCGCGGCCACACTGCAAAGCCTGTGCAGCAAGCGCGAAGCA GACGGCGTCGTCAGCTATACGGCGCTGCCGCTCGTGGAGGTCGCCAGGCTCAGCCCGGACTCGGTGGTCATTCAGGGGCC GATAGACGAAAACCTGATCGCCAGCATCAGCGCCATCAAAGACCACACCAATGCCTGGGTGACCTACGACCTGCCAGAGT TTCCGTCTTACGCTGAAGTCGACAAGAGCGCAGCCCCACTCGCCACAGTCCAGGCATCACTGCGCCACGGGCTGGCACGG GCAGACCTGATAACCGTTCCGACCAGCGCCTTGGCGCAACTGCTCGAAGACTCACACCCCAATGTTCAGGTCATCGAAAC GCGACTTGCACCTGCTCCCTGGTCAACGCTGCACAGCGAGCATCGGACTCGCTCCAAACCTCGCGTAGGCTGGGTCGGCA CAGCGAGTGAACTGGGCAACCTGCTGATACTGTCAGAAGTCATCAAGGCGCTGGCAGACCGCGTGGAATGGGTCATCATG GGCCCTTGCACACGCTGGTTGCGCCCCTACATCCACGAGCTGCGCTCGCCAGTGGAGGGCGCATTGTTCCCACAGGCACT GGCCAGTCTGAACCTGGATCTGGTGCTGGCGCCTGCAGAATCCAACCTGATCAACACGAGCAAAAGCCCGGTGGCCTTGC TGGAGTTCGGTGCGTGTGGCTTTGCAGTGATTTGCAGCAACCTACTGAGCATTCCTGAAGGCCTGCCCGTCACCCGCGTT GAAAACAGCACGGATGCCTGGATAAGTGCCATCGAGCAACACATTGATCAGATGGATGAGTGCACCCGCAAGGGCGAAGC GCTGAAGCAGGCGGTCATGGACAACTGGATGCTGACGGCCGATCACCTGCAAGGCTGGCGCACTGCCTGGCTGAAGGGCT GA Protein sequence : MSSSRLVSIVIPAYKPAFFEAALASALRQNHDDIEIIITDDCRNDGIKDIVEKLRPTSPWPILYAKNQTPLGEPHNIAQG IRLASGEYIKFLYDDDILLPDCVRLMFDVLHDSPDIKVVSATRKRIDAAGALLADNLYTVYPFGKNVVLNGPELVSFLAQ YPINFVGEPSAVMCRREDLLVFGQDIMSLEQVVIWGLGDLAIYAKLLRQGNLAMLARPLSYFRVSDQQSSEAFRKDPTLP REGHANFTRIPAALGWVRPEELNGKVKIAPLSQRDNVQEMDLLAYFDRRSDATVRNTRIAGWLGQRRPTPAQHALLNEYL QQHNGGPTIAIVVSDFNQQPESVLSTLQSLASDAPLLDKLKVFVLADYDRDQQTPLQAQLPWRDASLDNRATVINELMQD NDHDWWILIDAGTTFTPSGLLCAAMTLIDAPQACAVFGDEVTLHAQAGAHLAFRPDFSLDYLLACPAATSRNWLFNREKA LAVGGFDSSHAHAIELDLILRMIEDAGFTEFVHSPEPMIISPLWQAQDNYDQARTIQRHLHARGYAGGQVHALESGHYRI EYGHADQPLVSILVTSQDQLQTLLPCVESILENTTYPFYEILICDNNSQSAETTEWLATIDSMQSERIRVLRHEQTVSPS ALLNAAASHALGDYLLTLDSHGLIIQKDWLDHLLNHALRPEVGVVGAKIISTDGNVVGAGIILGLNGTAGAVTASAIAAS VSYAQRLETDQNYSAVSGSCLMIRKSVYDQVQGLDEHLFPARFNDVDLCLKARSAGHLVVWTPHAIVALRPNEVQHDAEA MDFAARALSHRWLHYMAWDPAYNKNLALTDSFVTQSNQALSWRPLVHRPLPVVLAQPCNHSAAGNRIAATLQSLCSKREA DGVVSYTALPLVEVARLSPDSVVIQGPIDENLIASISAIKDHTNAWVTYDLPEFPSYAEVDKSAAPLATVQASLRHGLAR ADLITVPTSALAQLLEDSHPNVQVIETRLAPAPWSTLHSEHRTRSKPRVGWVGTASELGNLLILSEVIKALADRVEWVIM GPCTRWLRPYIHELRSPVEGALFPQALASLNLDLVLAPAESNLINTSKSPVALLEFGACGFAVICSNLLSIPEGLPVTRV ENSTDAWISAIEQHIDQMDECTRKGEALKQAVMDNWMLTADHLQGWRTAWLKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fgtA | AAK15339.1 | flagellar glycosyl transferase | Virulence | Not named | Protein | 1e-143 | 43 |
