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Name : PSPTO_1624 (PSPTO_1624) Accession : NP_791449.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Resistance Product : sodium:solute symporter family protein Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 1780575 - 1782233 bp Length : 1659 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : ATGATCCGGCGCCTATCAGCAGCACTTGGCCTGGCCGCATTCGCGCCGACCCTCTGGGCGGCAGATGCATTGACTGGCGC AGTACAGAAACAACCCCTGAACGTCGCTGCGATCGTCATGTTCGTGATCTTCGTCGCGTTCACGCTGTACATCACCTACT GGGCCTCAAAGAAGAACAAGACCGCATCGGACTATTACTCGGCGGGTGGCAAGATCACCGGCTTTCAGAATGGTCTGGCG ATTGCTGGTGACTACATGTCGGCAGCCTCTTTTCTGGGTATTTCCGCACTGGTCTACACCTCCGGCTACGACGGCCTGAT CTACTCGATCGGCTTCCTGGTGGGCTGGCCGATCATTCTGTTCCTGATCGCCGAGCGCCTGCGTAACCTGGGTAAATACA CCTTTGCCGACGTAGCCTCTTATCGCCTCAAGCAAAAAGAGATTCGCACACTGTCTGCCTGTGGTTCGCTGGTGGTGGTG GCGTTTTATCTGATTGCGCAAATGGTCGGTGCGGGCAAGCTGATCCAGTTGCTATTTGGTCTGGACTACACCGTTGCAGT GGTGCTGGTCGGTATTCTGATGTGCCTTTACGTGCTGTTCGGCGGCATGCTGGCGACCACCTGGGTACAGATCATCAAAG CGGTGATGCTGCTTTCCGGTGCCTCGTTCATGGCGCTGATGGTCATGAAACACGTCAACTTCGACTTCAACATGCTGTTC TCCGAGGCGATCAAGGTTCACCCTAAAGGTGAAGCGATCATGAGCCCGGGCGGGCTGGTAAAAGACCCGATCTCGGCGTT CTCGCTGGGTCTGGCGTTGATGTTCGGTACGGCGGGTCTGCCGCACATTCTGATGCGCTTCTTCACCGTGAGTGATGCCA AGGAAGCCCGTAAGTCGGTGCTCTACGCCACTGGCTTTATCGGCTACTTCTACATCCTGACCTTCATCATCGGTTTTGGC GCGATCCTGCTGGTCAGCACCAACCCGGCATTCAAGGATGCAGCGGGTGCCTTGCTGGGCGGCAACAACATGGCGGCGAT TCACCTGGCCGATGCGGTCGGGGGCAGTCTGTTCCTGGGCTTCATTTCTGCCGTCGCCTTTGCGACCATCCTGGCGGTGG TTGCCGGTCTGACGCTGGCCGGTGCGTCGGCGGTCTCCCATGACCTGTACGCCAGTGTGATCAAGGCGGGCAAAGCCAAC GAGAAAGACGAAATCCGCATCTCGAAAATGACCACCATTGCACTGGCTGTCGTGGCGATCCTGTTGGGTATTGCTTTCGA AAGTCAGAACATCGCGTTCATGGTGGGCCTGGCGTTCTCCGTCGCGGCAAGTTGCAACTTCCCGATACTGCTGCTTTCCA TGTACTGGAAAAACCTGACCACCCGTGGCGCCATGATTGGTGGCTGGATGGGCCTGATCAGCGCTGTGGTGCTGATGGTG CTCGGCCCGACCATCTGGGTGCAGATCCTGCACAACCCTAAAGCCATCTTCCCTTACGAATACCCGGCGCTGTTCTCTAT CGCCATCGCATTCGTGGGTATCTGGTTCTTCTCCATCACCGACAAGTCGAAAGCGGCAGAGGGCGAACGCGCCTTGTTCT ACCCGCAGTTCGTCCGGTCGCAGACGGGGCTGGGTGCCAGCGGTGCGGTTTCTCACTAA Protein sequence : MIRRLSAALGLAAFAPTLWAADALTGAVQKQPLNVAAIVMFVIFVAFTLYITYWASKKNKTASDYYSAGGKITGFQNGLA IAGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKEIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYTVAVVLVGILMCLYVLFGGMLATTWVQIIKAVMLLSGASFMALMVMKHVNFDFNMLF SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAIHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKAGKAN EKDEIRISKMTTIALAVVAILLGIAFESQNIAFMVGLAFSVAASCNFPILLLSMYWKNLTTRGAMIGGWMGLISAVVLMV LGPTIWVQILHNPKAIFPYEYPALFSIAIAFVGIWFFSITDKSKAAEGERALFYPQFVRSQTGLGASGAVSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 1e-127 | 59 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 5e-74 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPTO_1624 | NP_791449.1 | sodium:solute symporter family protein | BAC0564 | Protein | 2e-179 | 78 |
| PSPTO_1624 | NP_791449.1 | sodium:solute symporter family protein | BAC0570 | Protein | 3e-137 | 64 |
