|
Name : rplS (PSPTO_1476) Accession : NP_791302.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1620789 - 1621139 bp Length : 351 bp Strand : + Note : see PMID:20190049 for expression data DNA sequence : ATGACTAACAAAATCATTCTTGCCCTCGAAGCAGAGCAGATGACCAAAGAGATCCCTACCTTTGCACCAGGCGACACCAT CGTCGTCCAGGTTAAAGTGAAGGAAGGCGACCGCGCTCGTCTGCAAGCATTCGAAGGCGTTGTCATTGCCAAGCGTAACC GTGGCGTGAACAGTGCTTTCACTGTTCGTAAAATCTCCAACGGTGTTGGCGTTGAGCGTACTTTCCAGACTTACAGCCCG CAAATCGACAGCATGGCTGTGAAACGTCGCGGTGACGTTCGCAAGGCCAAACTGTACTACCTGCGTGACCTGTCCGGTAA AGCAGCGCGCATCAAGGAAAAACTGTCCTGA Protein sequence : MTNKIILALEAEQMTKEIPTFAPGDTIVVQVKVKEGDRARLQAFEGVVIAKRNRGVNSAFTVRKISNGVGVERTFQTYSP QIDSMAVKRRGDVRKAKLYYLRDLSGKAARIKEKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-33 | 68 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 5e-29 | 59 |
