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Name : hrcV (PSPTO_1402) Accession : NP_791229.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrcV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 1539401 - 1541488 bp Length : 2088 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:11276509, GB:M27160, GB:M63235, GB:M63236, GB:M63237, GB:M63238, GB:M63239, GB:Y00819, GB:J03581, GB:U01873, SP:P14679, PID:340035, PID:340037, PID:340040, PID:37507, PID:37509, and PID:403422; identifi DNA sequence : ATGAATCAGATCATCAACTTTCTGAACATGGTCGCCTTGTCGGCCATGCGTCGCTCAGAGGTGGTCGGCGCGTTCTTCGT GATTGCCATCGTATTCATGATGATCACGCCACTGCCCACCGGGCTGGTCGACGTTCTGATCGCGGTGAACATCTGTATTT CCTGCCTGCTGATCATGCTGGCTATGCACCTGCCAAGGCCGCTGGCGTTTTCAACCTTCCCTGCGGTGCTGCTGCTGACC ACCATGTTCCGTCTGGCGTTGTCGATCTCGACCACGCGGCTGATTCTGCTCAACCAGGACGCCGGACACATCGTCGAGGC CTTCGGCCAGTTCGTCGTGGGCGGCAACCTGGCAGTAGGCCTGGTGATCTTCCTGATCCTGACGGTGGTCAACTTTCTGG TGATCACCAAGGGCTCGGAACGGGTTGCAGAAGTGGGCGCCCGATTCACGCTGGACGCCATGCCCGGCAAACAGATGTCC ATCGACAGTGACTTGCGGGCCAACCTGATTTCGGTCTACGAAGCACGCAACCGCCGCTCGGAACTGAACAAGGAAAGCCA ACTGTTCGGTGCGATGGACGGGGCAATGAAGTTCGTCAACGGCGACGCCATTGCCAGCCTGATCATCGTTGCCATCAACA TGATCGGTGGTATTTCCATCGGCGTGGTGCAGCACGGCATGACCGCCGGCGACGCCTTGCAGCTCTATACCGTACTGACC ATCGGTGACGGCCTGATCGCGCAGATTCCGGCGCTGCTGATCTCTGTTACCTGCGGCATGATCATCACCCGCGTACCCAA CACCGAAGCAGGCGTTGAAGCCAACATCGGTCGCGAAATCGCCGAGCAGATCACCAGCCAGCCCAAGGCCTGGATCATTG CCGCAGTGGCGATGCTCGGCTTCGCGGCACTGCCGGGTATGCCAACCGGCGTGTTCATCACCATTGCGATCATTTGCGGT GCCGGCGGCATGCTGCAACTGCAAAGGGCCAAACCCAAGGCAGAAGAACAAGGCGCCGTTGCGGTAGCGCCGGAGATGAA TGGCAAGGAAGACTTGCGCACGTTCTCCCCCAGCCGTCAGTTTGTCCTGCAGTTTCACCCTGGCCAGAACAGCGCGCTGG TCGATGCGCTGGTCAGTGAGATCCGTCAACGACGCAACCGGCTGGTGGTGCAGTTCGGCCTGACGCTGCCCTCCTTCATC ATCGAGTACGTGGACCATCTGCAGCCAGACGAATTTCGTTTCACGGTCTACGACGTCCCGATGCTCAAGGCGACCTTCAC CCAGACACACGTGGCAGTGGATGTCCGCCAGTTCAACGGTGAGGACGTGCCCGCCGCCATCTCCGGCACCACGGATCGCC AGGAAGATCAGTGGGTCTGGCTACCGGCCGAGCAAGGCGGCGAGCTGGCCACCGTCAGTTCCATGACCCTCATCACCGAA CGCATGGAGCGCGCGCTGCAATCCTGTGGCCCGCAGTTCATCGGCTTGCAGGAAACCAAAGCCATTCTCGGCTGGCTGGA ATCGGAGCAGCCTGAGCTTGCTCAGGAAATGCAGCGAGTGCTGACCCTCACGCGGTTCTCGGCGGTTTTGCAGCGACTGG CCTCCGAGTGCGTGCCATTGCGGGCGATCCGGGTGATTGCCGAAACACTGATCGAGCATTGCCAGCACGAGCGCGACACC AACGTGCTGACCGACTATGTGCGAATCGCCCTCAAGTCCCAGATTTACCACCAGTACTGCGGTGCCGATGGCTTGCAGGT GTGGTTGCTGACACCGGAAAGCGAAGGCTTGCTGCGTGACGGTCTGCGCCAGACACAGACAGAAACGTTTTTTGCGCTGA GCAACGACATCAGCCAGATGCTCGTGCAACAGCTGCATATCGCCTTTCCGTTGCGCGCGCCTGAACAGGCGGTGCTGCTG GTTGCACAGGATCTGCGCAGCCCGCTGCGCACCTTGTTGCGAGAAGAGTTCTATCACGTTCCCGTACTGTCTTTTGCGGA AATCAGCAACGCAGCCAAGGTCAGGGTCATGGGTCGCTTCGACCTTGAAGATGACCTCGAACCGATGGACAACGAGCATG CCGCTTGA Protein sequence : MNQIINFLNMVALSAMRRSEVVGAFFVIAIVFMMITPLPTGLVDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLT TMFRLALSISTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMS IDSDLRANLISVYEARNRRSELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVVQHGMTAGDALQLYTVLT IGDGLIAQIPALLISVTCGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIAAVAMLGFAALPGMPTGVFITIAIICG AGGMLQLQRAKPKAEEQGAVAVAPEMNGKEDLRTFSPSRQFVLQFHPGQNSALVDALVSEIRQRRNRLVVQFGLTLPSFI IEYVDHLQPDEFRFTVYDVPMLKATFTQTHVAVDVRQFNGEDVPAAISGTTDRQEDQWVWLPAEQGGELATVSSMTLITE RMERALQSCGPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPLRAIRVIAETLIEHCQHERDT NVLTDYVRIALKSQIYHQYCGADGLQVWLLTPESEGLLRDGLRQTQTETFFALSNDISQMLVQQLHIAFPLRAPEQAVLL VAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVRVMGRFDLEDDLEPMDNEHAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | NP_791229.1 | type III secretion protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcV | AAG33877.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | ABQ88352.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 93 |
| hrpI | AAA03015.1 | HrpI | Virulence | Hrp PAI | Protein | 0.0 | 93 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 90 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 90 |
| hrcV | AAR25631.1 | type III secretion protein HrcV | Not tested | Not named | Protein | 0.0 | 75 |
| hrcV | AAT96256.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 66 |
| hrcV | AAT96297.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 66 |
| hrcV | AAT96337.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 66 |
| hrcV | ABA47273.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 66 |
| hrcV | AAB05999.2 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 63 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 1e-100 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 1e-119 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcV | NP_791229.1 | type III secretion protein HrcV | VFG0064 | Protein | 2e-125 | 43 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | VFG0198 | Protein | 2e-106 | 41 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | VFG0384 | Protein | 1e-118 | 41 |
