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Name : hrpQ (PSPTO_1401) Accession : NP_791228.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrpQ Function : - COG functional category : - COG ID : - EC number : - Position : 1538375 - 1539367 bp Length : 993 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:11276510; identified by sequence similarity; putative DNA sequence : ATGTTTGAATTACGCGTACTGAACGGCCAGCACCAGGGCGCAGCACTGCCCCTGATCGGCGAGCAGTGGTCGATCGGCTC TGCTCAACAGCAGGACCTGGCGCTGGACGATTCTGGCGTGGAAAGCCTGCATTGCCGCCTGCAACGCCTGGACGACAGCT GGACCCTCAACGCTGAAGAGGGCGCGGTGTGCGATGAAGAGGGCCATTCACAGGCCAGCGTGGACCTGACGCTCAACACC GCGTTCATGCTCGGTTCAGTGTGGTTGTGCGTCTCGCCAGCCGGCGATGAGTGGCCGTCGGTTCCGGCCGTTATCCCCAA GCAGCCGCAGGCTGAGGCCGAACCTGCACGTCACGAAGCGCCGCTGGAAAAGGTCAAGTCGCGCTCGCAATTTCTCAACC GCACCACCGGGATAATCGCCGGCTTGCTGGTAGGCGTGATCGGCAGCGCCTGGAGCCTGACACGCCCGGCAGCCATCGTG CTCGACCAAGGCCCGGCGCACATCGCCTCAGCCATGACAACCGCGCCCGGCATGCCGAACGCTGCGCCCAAAACATCGCA ACCTGCAGCGAAACCCGCCGGCCCGGCGACTGACAAGCGCGTTCGCCTGGCCAGCATGGAAGCTGTGCGGCATCAGCTCA CTACCATGCTCAGCGACCGCATGCTGACTGACGTCAGCGTGGCCGAAACGCCAGAGGGATTGATGCTCAATGGGCATCTC AAGGAAGAGTCGCTGGTGGTCTATCAGCGCATGCTGCAGCGTTTCAAGGACCGTTATGACTCACCCGTGACGGTGCTTGA TAACGTCGCCAGCGCGCGCAATACCCTGCCGTTTGTTGTCGTGCAGATCATGACCGGGCCGCATGCGCATCTGGTGACCG CCGACGGTCGCCGCATGTATGTGGGCGATGAAAAAGACGGCCTGCGCCTGACCAAAATCGACGATCAGCGTTTGCAGTTC GATGGCGACCGACACATTGAGGTGACCTGGTGA Protein sequence : MFELRVLNGQHQGAALPLIGEQWSIGSAQQQDLALDDSGVESLHCRLQRLDDSWTLNAEEGAVCDEEGHSQASVDLTLNT AFMLGSVWLCVSPAGDEWPSVPAVIPKQPQAEAEPARHEAPLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPAAIV LDQGPAHIASAMTTAPGMPNAAPKTSQPAAKPAGPATDKRVRLASMEAVRHQLTTMLSDRMLTDVSVAETPEGLMLNGHL KEESLVVYQRMLQRFKDRYDSPVTVLDNVASARNTLPFVVVQIMTGPHAHLVTADGRRMYVGDEKDGLRLTKIDDQRLQF DGDRHIEVTW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpQ | AAG33878.1 | HrpQ | Virulence | Hrp PAI | Protein | 2e-147 | 100 |
| hrpQ | NP_791228.1 | type III secretion protein HrpQ | Virulence | Hrp PAI | Protein | 2e-147 | 100 |
| hrpJ3 | AAA81941.1 | HrpJ3 | Virulence | Hrp PAI | Protein | 4e-123 | 80 |
| hrpQ | ABQ88353.1 | HrpQ | Virulence | Hrp PAI | Protein | 4e-123 | 80 |
| hrpQ | AAT96140.1 | HrpQ | Virulence | T-PAI | Protein | 3e-110 | 72 |
| hrpQ | AAT96194.1 | HrpQ | Virulence | T-PAI | Protein | 3e-110 | 72 |
| hrpQ | AAR25632.1 | type III secretion protein HrpQ | Not tested | Not named | Protein | 4e-65 | 45 |
