|
Name : hrpO (PSPTO_1399) Accession : NP_791226.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrpO Function : - COG functional category : - COG ID : - EC number : - Position : 1536580 - 1537026 bp Length : 447 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:3282777, and GP:11276512; identified by sequence similarity; putative DNA sequence : ATGGACGAAACACTCGAGGAAGACCCGCAACGGGAGGCTCTGGAACAGGTGATCAGCCTGCTGACGCCGCTGCGCCAGCA TCGTCAGGCAAGTGCCGAGCGAGCACATCGCCAGGCGCAGGTGGAACTGAAATCGATGCTCGACCACTTATCAGAGACCC GGGCGTCACTGGACCAGGAACGTGACAACCACAAGCGACGTCGCGAGAGCCTGTCGCAGGACCATCTGCAAAAAACCATC AGCCTGAACGATGTCGACCGATGGCATGAGAAAGAAAAAAACATGCTCGACCGCCTGGCCTTTATCCGCCAGGACGTGCA GCAACAGCAATTGCGGGTAGCCGAACAGCAGACGTTGCTTGAACACAAACGCCTGCAAGCCAAAGCGTCTCAGCGCGCGG TCGAGAAACTCGCCTGCATGGAGGAGACGCTCAACGAAGAAGGTTAA Protein sequence : MDETLEEDPQREALEQVISLLTPLRQHRQASAERAHRQAQVELKSMLDHLSETRASLDQERDNHKRRRESLSQDHLQKTI SLNDVDRWHEKEKNMLDRLAFIRQDVQQQQLRVAEQQTLLEHKRLQAKASQRAVEKLACMEETLNEEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpO | NP_791226.1 | type III secretion protein HrpO | Virulence | Hrp PAI | Protein | 1e-53 | 100 |
| hrpO | AAG33880.1 | HrpO | Virulence | Hrp PAI | Protein | 7e-54 | 100 |
| hrpO | ABQ88355.1 | HrpO | Virulence | Hrp PAI | Protein | 2e-47 | 85 |
| hrpJ5 | AAA81943.1 | HrpJ5 | Virulence | Hrp PAI | Protein | 2e-47 | 85 |
| hrpO | AAT96196.1 | HrpO | Virulence | T-PAI | Protein | 4e-40 | 76 |
| hrpO | AAT96142.1 | HrpO | Virulence | T-PAI | Protein | 1e-39 | 75 |
