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Name : hrpF (PSPTO_1387) Accession : NP_791214.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrpF Function : - COG functional category : - COG ID : - EC number : - Position : 1528246 - 1528470 bp Length : 225 bp Strand : + Note : see PMID:20190049 for expression data; similar to GP:3228545, GB:U09067, PID:483876, and PID:553456; identified by sequence similarity; putative DNA sequence : ATGATCAGTTTCAACAGCTTGCAACGCCATCTCGACAATTCGGTGAGCCGTGCTCACACCAACATGGACCAGGCAGCGAT GGAAGCCTCCGAGAGTGGCACCGTCGAAGACCTGCAGGCATTCAACGATGCCCAGCAGCAGGTCGATGTCGCCGGTATTG CCGTCAATGAATGCCTGCGTGCCAAGCACGGTATCAATAAAGCAGTCATCGATGGAATTCAGTGA Protein sequence : MISFNSLQRHLDNSVSRAHTNMDQAAMEASESGTVEDLQAFNDAQQQVDVAGIAVNECLRAKHGINKAVIDGIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | NP_791214.1 | type III secretion protein HrpF | Virulence | Hrp PAI | Protein | 5e-28 | 100 |
| hrpF | AAC34754.1 | HrpF | Virulence | Hrp PAI | Protein | 5e-27 | 96 |
| hrpF | AAT96154.1 | HrpF | Virulence | T-PAI | Protein | 5e-10 | 41 |
| hrpF | AAT96208.1 | HrpF | Virulence | T-PAI | Protein | 5e-10 | 41 |
