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Name : hrpD (PSPTO_1385) Accession : NP_791212.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrpD Function : - COG functional category : - COG ID : - EC number : - Position : 1527004 - 1527534 bp Length : 531 bp Strand : + Note : see PMID:20190049 for expression data; similar to GP:3603316, and GP:9800449; identified by sequence similarity; putative DNA sequence : ATGATGAGCCTTTCTGCCGAGGATCACTGGATTCACTGGTGGTGCAACCCCTGGCAGTGGGCACATTCGGAGTGGCATGA CCGATTCGCCAACGCTCGTGGGTTATCGGTCAGTGACTGCGATGCGCTCATGGCCAGCCGTCATGGCGTGTTTCTGCAGA GTCTGGGCATTGACCCGGCTCAGCCGCCAGCGCCCGCGGAACCGGTGCTGCGCTGGTTGGCGCTGACGCCCTCGCAGCGT GAGCAGGCGCTAAGCCTGGCGCAGTGCATCTGCTTCTCCCGTAACGAAAGCGACGGCCCTGACGGTCAATGGTGCTGGGG GTTGACCAAAGCGCTGCGCCCCGGTGTCTGGCTGGAGTTTGAACACGAGGACGCGCGTCTTCTGCTGGGCGCCTGGCTTG GGCCGCAATACTGGTCGCGACTGTGTCTGGAGTGGCCGCCCAATGAAGTGCCCGACACCCCCGGCAAGGCACCCGAAAAC AAACTTCAGGCGTTATGGCAGGCCATCATGTGGCGCGTCACGGCTGCCTGA Protein sequence : MMSLSAEDHWIHWWCNPWQWAHSEWHDRFANARGLSVSDCDALMASRHGVFLQSLGIDPAQPPAPAEPVLRWLALTPSQR EQALSLAQCICFSRNESDGPDGQWCWGLTKALRPGVWLEFEHEDARLLLGAWLGPQYWSRLCLEWPPNEVPDTPGKAPEN KLQALWQAIMWRVTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpD | NP_791212.1 | type III secretion protein HrpD | Virulence | Hrp PAI | Protein | 2e-75 | 100 |
| hrpD | AAB00130.1 | HrpD | Virulence | Hrp PAI | Protein | 8e-55 | 99 |
| hrpD | AAB05081.1 | HrpD | Virulence | Hrp PAI | Protein | 7e-46 | 79 |
| hrpD | AAC35802.1 | HrpD | Virulence | Hrp PAI | Protein | 3e-59 | 75 |
| hrpD | AAT96156.1 | HrpD | Virulence | T-PAI | Protein | 8e-54 | 62 |
| hrpD | AAT96210.1 | HrpD | Virulence | T-PAI | Protein | 8e-54 | 62 |
