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Name : hrcJ (PSPTO_1384) Accession : NP_791211.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrcJ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1526201 - 1527007 bp Length : 807 bp Strand : + Note : see PMID:20190049 for expression data; similar to GP:9800448, GB:U09068, PID:483878, PID:563405, PID:563415, PID:563418, PID:563428, PID:563458, PID:563460, PID:563477, PID:563481, and PID:976302; identified by sequence similarity; putative DNA sequence : GTGAATTTTCTGAGCGCAGGGCTGCTGCTGTTGTGCATGCTGCTGCTCGGCGGCTGCAGTGATGAGACTGATTTGTTCAC TGGCTTGTCCGAGCAGGATTCCAATGAGGTCGTAGCGCGCCTCGCCGATCAGCATATCGATGCGCGTAAACGTCTGGAGA AAACCGGCGTTGTCGTGACTGTCGCCACCAGCGAAATGAACCGCGCCGTGCGCGTGCTCGACGCTGCGGGTCTGCCTCGG CGCTCGCGCACCACGCTGGGGGAGATTTTCAAGAAGGAAGGGGTGATTTCGACGCCGCTTGAAGAGCGTGCCCGTTACAT CTACGCCTTGTCCCAGGAACTTGAAGCCACGCTGTCGCAGATCGACGGAGTCATTGTGGCCAGGGTGCATGTGGTGCTGC CCGAGCGCATCGCGCCGGGCGAACCTGTTCAACCGGCTTCTGCTGCGGTGTTCATCAAGCACTCTGCTGCACTTGATCCC GACAGTGTGCGCGGACGTATTCAACAGATGGTCGCCAGCAGTATTCCCGGTATGTCCACGCAATCTGTCGATTCGAAAAA GTTTTCCATCGTGTTTGTGCCTGCTGCAGAGTTCCAAGAGACCACGCAATGGGTGAGCTTCGGGCCCTTCAAGCTGGACA GCACGAACTTGCCGTTCTGGAACCTGATGCTCTGGGTGGCACCTGTCGGTCTTGCGTTGGTGTTGCTGATCGGTGCACTG CTGGTGCGCAGTGACTGGCGCGCCAGTCTGTTGCGACGGATCGGGTTTGGCAGTCGCGGTCGTTCAACGCTGCCGGCACG TGCATGA Protein sequence : MNFLSAGLLLLCMLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLPR RSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDP DSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMLWVAPVGLALVLLIGAL LVRSDWRASLLRRIGFGSRGRSTLPARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 3e-101 | 100 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 2e-101 | 100 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 3e-97 | 91 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 4e-95 | 88 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 4e-95 | 88 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 8e-92 | 87 |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 8e-58 | 67 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 1e-57 | 67 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 1e-57 | 67 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 2e-57 | 66 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 8e-55 | 66 |
