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Name : hrpB (PSPTO_1383) Accession : NP_791210.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrpB Function : - COG functional category : - COG ID : - EC number : - Position : 1525818 - 1526192 bp Length : 375 bp Strand : + Note : see PMID:20190049 for expression data; similar to GP:790909, GB:U09066, SP:P01768, SP:P01769, SP:P01770, SP:P01771, SP:P01772, PID:483874, PID:488294, PID:496012, PID:496026, PID:499604, PID:553396, PID:553398, PID:553399, PID:553408, PID:553434, PID:5534 DNA sequence : GTGACCATTTCCCAACTCAGCAATTTGAAAAGTGTATCGCCGGAGCTTGGGCAGAATGCTCATCAGGGGCTCGGCTCCGA ACCCGTTCAGGCGGATGTCGACCTATTCAATGCGGCGATGCGCCCTGACAGCGGGCCAGCAGCGTCGCACCTGTCCGACC GGATAGCCAGTGCGCTGTCCGAGCGGCTGGGCAGTACCGAGAAGCTTTCACAGCAAGCATTACGCCAGATGAAGAAAGTG TCGAACACCGAAGATCCTGGAGACATCGTGCAGATGAGTCGGGCGTTGTCGCAGTGCTCGTTGCAAATGGCGTTGACGAC CAAGGTCGTGAGCAAGAGCGCTCAGGCGCTCGACAAGTTGACCAACCTGCAGTAG Protein sequence : MTISQLSNLKSVSPELGQNAHQGLGSEPVQADVDLFNAAMRPDSGPAASHLSDRIASALSERLGSTEKLSQQALRQMKKV SNTEDPGDIVQMSRALSQCSLQMALTTKVVSKSAQALDKLTNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB | AAB00128.1 | HrpB | Virulence | Hrp PAI | Protein | 7e-52 | 100 |
| hrpB | NP_791210.1 | type III secretion protein HrpB | Virulence | Hrp PAI | Protein | 1e-51 | 100 |
| hrpB | AAB05079.2 | HrpB | Virulence | Hrp PAI | Protein | 6e-35 | 68 |
| hrpB | AAB00137.1 | - | Virulence | Hrp PAI | Protein | 2e-34 | 65 |
| hrpB | AAT96158.1 | HrpB | Virulence | T-PAI | Protein | 3e-33 | 64 |
| hrpB | AAT96212.1 | HrpB | Virulence | T-PAI | Protein | 3e-33 | 64 |
