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Name : hrpR (PSPTO_1379) Accession : NP_791206.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III transcriptional regulator HrpR Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 1522289 - 1523233 bp Length : 945 bp Strand : + Note : see PMID:20190049 for expression data; similar to GB:X74863, SP:P52954, PID:1617116, and PID:510998; identified by sequence similarity; putative DNA sequence : ATGAGTACAGGCATCGATAAGGACGTCCGAGAGTGTTGGGGCGTAACTGCATTATCAGCGGGTCATCAAATTGCAATGAA TAGCGCGTTTCTGGATATGGACTTGCTGTTGTGCGGGGAAACCGGCACCGGCAAGGACACACTGGCCAACCGCATTCACG AGTTGTCCAGCAGGTCGGGACCCTTTGTGGGCATGAACTGCGCCGCCATTCCCGAGTCGCTGGCAGAGAGCCAGTTATTC GGTGTGGTCAACGGTGCATTCACCGGCGTATGCCGGGCTCGCGAGGGCTACATAGAGGCCTCCAGTGGTGGCACCTTGTA CCTGGATGAAATCGACAGCATGCCGTTGAGCCTGCAGGCCAAACTGCTGCGTGTGTTGGAGAGTCGAGGTATCGAGCGTC TGGGCTCGACCGAATTCATCCCGGTGGATCTGCGGATCATTGCCTCGGCCCAGCGGCCACTGGATGAACTGGTGGAACAA GGACTTTTCCGTCGCGACCTGTTTTTTCGGCTCAACGTGCTGACGCTTCACTTGCCAGCCTTGCGCAAACGTCGTGAACA GATCCTGCCATTGTTCGACCAGTTCACCCAGGGTATCGCTGCCGAGTTCGGACGTCCCGCTCCTGCGCTGGACAGCGGGC GTGTGCAGCTGCTGCTCAGCCACGACTGGCCGGGCAACATCCGCGAATTGAAGTCTGCAGCCAAGCGCTTCGTACTCGGC TTCCCCTTGCTGGGCGCCGACCCTGTGGAAGCGCTTGACCCTGCCACGGGGCTGCGCACGCAAATGCGCATCATCGAGAA AATGCTCATCCAGGATGCCTTGAAGCGGCACAGGCACAATTTCGACGCGGTGCTTCAGGAGTTGGAGTTGCCAAGACGCA CCCTGTATCACCGCATGAAGGAACTGGGAGTTGCAGCGCCGATCGCTGCGACGGCCGGGGTCTGA Protein sequence : MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLF GVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQ GLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAPIAATAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 5e-146 | 100 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 2e-143 | 100 |
| hrpR | AAC35799.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 2e-130 | 90 |
| hrpR | AAT96162.1 | HrpR | Virulence | T-PAI | Protein | 5e-125 | 84 |
| hrpR | AAT96216.1 | HrpR | Virulence | T-PAI | Protein | 5e-125 | 84 |
| hrpR | ABQ88368.1 | HrpR | Virulence | Hrp PAI | Protein | 1e-123 | 84 |
| hrpR | AAA17651.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 1e-123 | 84 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 2e-85 | 66 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 2e-85 | 66 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 7e-81 | 65 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 7e-81 | 65 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 4e-83 | 65 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 8e-83 | 65 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 1e-80 | 64 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 7e-81 | 60 |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 4e-82 | 60 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 4e-82 | 60 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 2e-81 | 59 |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 2e-69 | 56 |
