Gene Information

Name : PSPTO_1356 (PSPTO_1356)
Accession : NP_791183.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : isochorismatase family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1335
EC number : -
Position : 1493453 - 1494139 bp
Length : 687 bp
Strand : -
Note : identified by match to PFAM protein family HMM PF00857

DNA sequence :
ATGAGCGAACGTCACGTTGATTCGGCGCCCTACCCGTGGCCCTGGAACGGCCAGTTGCATGCACATAACACGGCATTGAT
CGTGATCGACATGCAGACCGACTTTTGCGGCGTCGGCGGCTATGTGGACAGCATGGGCTACGACCTGGCGCTGACCCGCG
CGCCCATCGAACCGATCAGGGCGCTACTGGCCGTGATGCGCCCGCTCGGCTTCACCATCATTCATACCCGCGAAGGCCAC
CGCCCGGACCTCAGCGACCTGCCGGCCAACAAACGCTGGCGCTCGCAGCGCATAGGCGCGGGGATCGGCGATCCCGGCCC
GTGCGGCAAGATTCTGGTACGCGGCGAACCGGGCTGGGAAATCATCGATGAACTGGCCCCACTGCCCGGCGAAATCATCA
TCGACAAACCCGGCAAAGGCTCGTTCTGCGCCACTGATCTGGAGCTGATCCTGCGCACGCGCGGCATCGACAACCTGATC
CTGACCGGCATCACCACCGACGTCTGCGTGCACACCACGATGCGCGAAGCCAATGACCGCGGCTTTGAATGCCTGCTGCT
TGAAGACTGCTGCGGCGCGACCGATCCAGCCAACCATGCCGCCGCACTGAGCATGGTCAAGATGCAGGGCGGCGTGTTCG
GCGCAGTCGGCCACTCTTCGCTGCTTCGCACTGTGCTGGAGGCTTGA

Protein sequence :
MSERHVDSAPYPWPWNGQLHAHNTALIVIDMQTDFCGVGGYVDSMGYDLALTRAPIEPIRALLAVMRPLGFTIIHTREGH
RPDLSDLPANKRWRSQRIGAGIGDPGPCGKILVRGEPGWEIIDELAPLPGEIIIDKPGKGSFCATDLELILRTRGIDNLI
LTGITTDVCVHTTMREANDRGFECLLLEDCCGATDPANHAAALSMVKMQGGVFGAVGHSSLLRTVLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2632 YP_859426.1 isochorismatase hydrolase Not tested Not named Protein 1e-41 50