|
Name : PSPTO_1231 (PSPTO_1231) Accession : NP_791061.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : insecticidal toxin protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 1348208 - 1350976 bp Length : 2769 bp Strand : + Note : similar to GP:3265044, and GP:16416915; identified by sequence similarity; putative DNA sequence : ATGAATACTACGAGCGCTGTACTGCACCGTTACACCCCGCATCTACAGGTGGTAGACCCGCGTCGGCTGTTGACCGATTC AGTCGTTTTCTGCCGTCTGAAGCCTGCTGAAGAACCGCAGGCCAGGCAAAGTCATACGGCCTTTGATGTCGCGGGTCGTC CGTCGATGAGCTGGGATCCGCGCCTGTGGGCTGATCGGGCGCCCGCCAATCTCAGCGTCATTCATTCGCTCAGCGGTCAG GTGCTGGCCAGTGACAGCGTCGATGCTGGCTGGCGAGTGTCGTTAGCGGGGGAGGCCGGGCAGGCGCTGGTGGTCTGGGA CGCTCGGTGCGTTGTGCGACGCTTCGGGTACGACGCGTTGCTCAGGCCCACCGAGGTTTTTGAAGATGAGCACTGCGTTG AGCGTCTTCTCTATGGCGGTCCTGATTCGACTGATCACAACCAGTGTGGTCAGTTGATTCGTCATGACGATCCGGCAGGT ACGCGGCTTGACGATGAGTTCGGTCTTTCCGGAAGTGTGATCAGTCAAACGCGGCGCTTCCTGCAAAACCTCGACGAGCC TGACTGGCCCGAGTCACTCACCGGGCGCGATGCCTTGCTGGAGCCTGGCGAAGGGGCGACTACTCGCTGGCGCTACAACT CCGTGAACGAAACTCTCCGGCAGACTGATGCGCAGGGCAATGTTCAGTTTCTGGATTACACCGTCGCTGGGCTGTTGAAA AGCAGTCGTTTGCAAATGAATGGTCAAGCCGAACAGGTTCTGGTCAGTGCCATTCAATACGATGCACAGGAGCGGGTGGT GTCGGAAACGGCGGGCAACGGAGTAATGAGCACTGCGCGGTATGACACTGAAGACGGCCGTTTGCTGGCGTTGAATGCCA CGCGTAGTAATGGGCAGTTGTTGCAGGATTTGCGCTACGACTATGACCCGGTCGGTAATGTGATCCGTGTCGATGATCGT GCTCTGCCAGCCATCTCCAAAGGCCAGCGCATCGACTCGATTTCGACCTATCAATACGACACGCTTTATCAACTGATCGA AGCCTCGGGCAGGGAATGGGCAGTCGTTAATCATGGCCCGGTGCTGCCTGGTTTCCAGAGTCCTGCCGATCCTTCGACGC TGGCTGATTACACGCAGACGTATCGCTACGATGCCGGCGGTAACCTGCAACAGCTTACCCATACAGGCACGCAGTCCCAT TCGCGCGCGCTGGTCACCGCACGTTGCAGCAACCGCAGTCTGCCGGTGATCAATGGCCACACACCTGACGAAGCAGAAAT TGCTGCTGCCTTTGACGCGAGCGGTAATCTGCTCGCACTGCAAGCCGGGCAACACCTGAGCTGGGATCGACGCAACCAGT TGCAGCACGTGCGCCCCGTTATTCGTGAAAATGGCATGGACGACAGCGAACGCTACAGCTACGACGCCAGCGGCCAGCGC CTGCGCAAGGTGCGCACCACGCAGGCCAAAACCATTACCCATACGGCCGATGTACGTTACCTGCCCGGTCTTGAAATCCG TACCGATACGGCCACTGGCGAAACCCTGCACGTTGTTGTGGCCCAGGCCGGGCGCAATAACGTGCGCGTGCTGCATTGGG CGTCTGGCAAGCCCGACGCGCTTGAAAATGATCAGACTCGCTACACATTGAACGACCACCTGGGATCCGGCACGCTGGAA CTGGATGGACAGGCGCAGCGTATCAGCCAGGAAAGTTATTACCCGTTCGGCGGCACGTCATGGTGGGCGGGGCGCAATGC CATCGAAGCGAATTACAAGACCGTGCGTTACTCGGGCAAGGAGCGGGATGCGACGGGGCTTTATTACTACGGGTTGCGGT ATTACGCACCGTGGTTACAGCGTTGGATCAATCCGGACCCGGCGGGGGCGGTGGATGGGTTGAACGTGTATCTGTTTGTC CGTAATGATCCTTGCGGAGGTAGTGACGATGGTGGACTGGTTTATCGAGGAATGAATGATCGTATTGATCGACATTATGA TAAGACGCACACGATCAAATACCGAGGGGTCTCAGATATGCGGCGGGCCGACGAGCATAAACTGGTGTACACATTGGATC TCGCGCTAGAGGAAAGCGTGGCCGTTATGACGCGTGAAGTAGAGAAGCTGAAGGCGGGTGATACTGATGATCTTTATGCC TTTCTCGGTATGAAAAAAAACGATCAAAAGGACTCATCCAGTCGGCTCGTAAAAAAAGTTATAAACGGCTATGAAAAGCT CATCAAGTCTGTTGCTCGTTATCAGGACGGGGGAGATTTGCGCGACCAGCTAGTCTCTGTTGAAGGGCATCCGGAAACTC CGAATATGGCAGCATTTGTTGTAAAGAGCGATCCCCATAGGCGTTTGTTTTTTACTGACTATTCGAGAACATTAAATGTG GTGTCCAGTGTGCAGACTCTCATTCATGAAGTGTCTCATTTGGAGCTTGATACGAATGACGATTTCTACTACTTGGGCTT TAACCTTAAGGCCACGTTTTCCCCCGATTTTGCAGGAGGTCTTTTAATCGGTAGTGTCAAAGACGCCGTTCAGAAGAATG TGGACTTAAGAGCGAGCTATAAGCCGTGGCGTCATGGGTTCAAAAAATTTGAAACATGGTTGTCTCAGGTGGCTGACTTT TGGGGAGGCTTCGCCGTCGCTCAGATCAGCCCAAAGAGAAGCCTGGCATTGCATAAACTGTCAATTGATCGCTTTGAGGC GAGAGGGGCTGGCCGCCATGCCTCAAACCATCAGCGTAAAAGCACATGA Protein sequence : MNTTSAVLHRYTPHLQVVDPRRLLTDSVVFCRLKPAEEPQARQSHTAFDVAGRPSMSWDPRLWADRAPANLSVIHSLSGQ VLASDSVDAGWRVSLAGEAGQALVVWDARCVVRRFGYDALLRPTEVFEDEHCVERLLYGGPDSTDHNQCGQLIRHDDPAG TRLDDEFGLSGSVISQTRRFLQNLDEPDWPESLTGRDALLEPGEGATTRWRYNSVNETLRQTDAQGNVQFLDYTVAGLLK SSRLQMNGQAEQVLVSAIQYDAQERVVSETAGNGVMSTARYDTEDGRLLALNATRSNGQLLQDLRYDYDPVGNVIRVDDR ALPAISKGQRIDSISTYQYDTLYQLIEASGREWAVVNHGPVLPGFQSPADPSTLADYTQTYRYDAGGNLQQLTHTGTQSH SRALVTARCSNRSLPVINGHTPDEAEIAAAFDASGNLLALQAGQHLSWDRRNQLQHVRPVIRENGMDDSERYSYDASGQR LRKVRTTQAKTITHTADVRYLPGLEIRTDTATGETLHVVVAQAGRNNVRVLHWASGKPDALENDQTRYTLNDHLGSGTLE LDGQAQRISQESYYPFGGTSWWAGRNAIEANYKTVRYSGKERDATGLYYYGLRYYAPWLQRWINPDPAGAVDGLNVYLFV RNDPCGGSDDGGLVYRGMNDRIDRHYDKTHTIKYRGVSDMRRADEHKLVYTLDLALEESVAVMTREVEKLKAGDTDDLYA FLGMKKNDQKDSSSRLVKKVINGYEKLIKSVARYQDGGDLRDQLVSVEGHPETPNMAAFVVKSDPHRRLFFTDYSRTLNV VSSVQTLIHEVSHLELDTNDDFYYLGFNLKATFSPDFAGGLLIGSVKDAVQKNVDLRASYKPWRHGFKKFETWLSQVADF WGGFAVAQISPKRSLALHKLSIDRFEARGAGRHASNHQRKST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 2e-100 | 41 |
