|
Name : PSPTO_1123 (PSPTO_1123) Accession : NP_790957.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3272 EC number : - Position : 1236463 - 1237419 bp Length : 957 bp Strand : - Note : see PMID:20190049 for expression data; identified by Glimmer DNA sequence : ATGCCTGCAATCGAAAAACCCAAACTCGGGATCAGTGCGTGTCTGATGGGTGCCGAGGTTCGCTTCAATGGCGGGCATAA GGAGTCTCATCTGTGCACGCAGGCGCTGAGCAAGTATTTCGATTTTGTTCAGGCGTGCCCCGAAGTCGCGATCGGCTTGG GTATCCCGCGTGAGCCAATCAGGCTGGTGGGCGACGCCGAACACCCCAAGGCGCTGGGCACGGTCAATCGTGAGCTGGAT GTTACTCAGGCGCTGGCGGATTACGGCATTCAGATGGCGGACGAGCTGGGTGATATCTGCGGTTATATTTTCATGCAGAA GTCCCCGTCGTGCGGTCTGGAGCGGGTCAAGGTCTACCGTGAAAACGGCGCGCCGGTTGACGGCGGTGGGCGCGGCATCT ACGCGCAGGCCTTTTGCGAGCGTCACCCTAACCTGCCGGTCGAAGAAGACGGGCGTCTGAACGATGCCGTGCTGCGCGAA AACTTCGTGACCCGTGTGTTTGCCTACGCGGCCTGGCAGCAATTGTTGAAAGACGGCATCACCCGTCGAGCGTTGACCGA ATTTCACTCGCGCTACAAATACCAACTGATGGCCAACGACCCGGTGCAGTACAAAGCGCTGGGCAAGATGCTGGGCAGCA TGGGCCGCAGCGACCCCAATGAAATCGCCCCGCTGTATTTCAGCGAACTGATGGCCGCCCTGAAAAAGTGCGCGACCCGG CGCACCCACACCAACGTTCTGCAACATCTGTGCGGCTATCTGAAACAAACCATCAGTGCCGAGGACAAGCAGGAAATTCA GGAAGTGATCGGCCAGTATCATCAGGGCATCGTGCCGCTGATCGTACCGCTGACCCTGCTCAAGCATCATTTTCGCCAAC ACCCGGATCCTTATGTAGCGCTGCAGGTGTACATGCAGCCTCATCCGGAAAACCTCAGCCTGCGAAATGCGATTTGA Protein sequence : MPAIEKPKLGISACLMGAEVRFNGGHKESHLCTQALSKYFDFVQACPEVAIGLGIPREPIRLVGDAEHPKALGTVNRELD VTQALADYGIQMADELGDICGYIFMQKSPSCGLERVKVYRENGAPVDGGGRGIYAQAFCERHPNLPVEEDGRLNDAVLRE NFVTRVFAYAAWQQLLKDGITRRALTEFHSRYKYQLMANDPVQYKALGKMLGSMGRSDPNEIAPLYFSELMAALKKCATR RTHTNVLQHLCGYLKQTISAEDKQEIQEVIGQYHQGIVPLIVPLTLLKHHFRQHPDPYVALQVYMQPHPENLSLRNAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf319 | NP_460354.1 | inner membrane protein | Not tested | SPI-2 | Protein | 6e-60 | 41 |
| STY1731 | NP_456139.1 | putative pathogenicity island protein | Not tested | SPI-2 | Protein | 5e-60 | 41 |
| t1257 | NP_805060.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 5e-60 | 41 |
| SC1410 | YP_216397.1 | inner membrane protein | Not tested | SPI-2 | Protein | 3e-60 | 41 |
| ORF 319 | CAB37410.1 | - | Not tested | SPI-2 | Protein | 5e-60 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPTO_1123 | NP_790957.1 | hypothetical protein | VFG0490 | Protein | 3e-60 | 41 |
