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Name : clpB (TWT746) Accession : NP_787874.1 Strain : Tropheryma whipplei Twist Genome accession: NC_004572 Putative virulence/resistance : Virulence Product : ATP-dependent protase ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 855974 - 858091 bp Length : 2118 bp Strand : - Note : heat shock protease DNA sequence : TTGTGTGGCGGGAGTTTCATGTCTGAATCACAGTCTGAATTAGACAAGTACGGCACGAACCTCACAAAGACTGCGGCAAC AAACAAGCTCGATCCGGTGATAGGCCGCGATGCAGAGATCCGGCGGGTGTGTCAGATTCTCTCCAGGCGAACTAAGAATA ACCCCGTTCTGATAGGGTCAGCAGGTGTTGGTAAAACTGCTATAGTTGAGGGCCTTGCGCAGCGTATTGTTGCAGGGGAT GTTCCTGAGAGTTTGCGGAACAAGGAAATAGTTAGTCTCGATTTATCGGCCCTGCTTGCTGGTGCATCTTACAGGGGAGA GTTCGAGAAACGTGTCAAAAATCTTTTGGAAGAGATACAAAAGTCTAAGGTAATAATCTTCATAGATGAGGTTCACACAC TTATGAGTGCCGGCGCAGCAGAAGGTGCAATTGCGGCGGGTAATATGCTAAAACCCCTTTTGGCTCGAGGGGAACTCAGG CTTATTGGCGCGACCACTCTGGATGAATATCGTGAGCATTTGGAAAAAGACCCTGCACTGGAAAGACGATTCCAGCAAGT GTTTGTTGGTGAGCCAAATCTTGAAGACTGCATAGCGATTATGCGGGGCTTGAAAGAGCGTTACGAGGCTCATCATAAAG TGAGTATATCCGACACAGCACTTGTGACTGCCGTTGAGTTGTCGAGTCGATATATAACGGGCAGGCAACTTCCTGATAAG GCAATCGACTTGCTCGACGAGGCAGCCAGTTCATTGCGCATGGAAATTGATTCATCACCGGTTGAGCTTGATCAGCTTCG TAGGGAGGTTGATCGGTTGCGACTCGAGGAGTTGGCATTAAAGAGTGAGAATGACCCTACGAGTGAACAACGTCTAAGAT CTATAACTAACCAACTTTCTGGCAAGCAAGAAATGTTGAATACATTACAGGCAAGCTGGAACTCCGAGAGGGCGCGTCTG AATCAGATTGGCGCTTTGAAGGAGCAGATTGATATTGCGAAACAATCTGCAGATATTGCCCAGCGCGAGGGTCGCCTTGA AGATGCATCACGACTTCTTTATGCAACAATTCCACAATTGCAGAAAAATTTGGCGGAGAAGTTGGAAGAACAGGACTCTG CCCCGCTTGTCAGTGACCAGGTAATGCCGGAAGATATTGCGTCTGTTGTTGAGGGATGGACAGGTATTCCTGTAAAAAAG CTTATGCAAAAAGATGCCAAACAGCTGCTGCATCTTGAGGAGGATTTGTCCAAATCTGTTATAGCCCAGAAGGTAGCCAT AGGTGTTATTGCGGATGCAGTACGGCGTTCGCGCGCGGGACTGTCGGATCCAAACCGACCTTCCGGAACTTTTTTATTTC TCGGCCCAACGGGGGTTGGAAAAACACAACTGGTTAAAGCTTTAGCATCTTTGTTATACGATGGTGAAATTGTAAGAATT GACATGTCGGAGTATTCAGAAAAATTCTCTATCTCACGTCTTATTGGCGCTCCCCCGGGGTATATCGGTCATGAAAGCGC TGGACAGCTTACTGAGTCTGTTAGGCGGCGGCCATATTCAGTTGTATTGTTTGATGAAGCAGAAAAAGCGCATCCTGAGG TTTTTGATATCCTACTGCAGGTTCTGGATGAAGGACGCCTAACAGACTCTCATGGTCGCACTGTTGACTTTAGAAACACG ATTATAGTTTTAACTTCTAATATAGGCTCGCGTTACCTATCAGACATTTCCCTTGAGGCTACTACAGCGCACGAGTATGT TAATGATGAGGTTCGCAGAACCTTTCGTCCAGAATTTTTGAACAGACTCGATGAAATTGTTATTTTTGAGCCATTGTCGC AAAGTGATATTTGTCAAATTGTTGACCTGAATATAGAATCCCTGAATAAGCGGATCAAGGATAGGCGGATTGTTGTGACA GTCAGTGAGGATTTAAGGCGTTGGCTGTCAAAGAGCGGCTATGACGTGATTTACGGCGCGCGGCCATTGAGGAGGCTTAT TCAGCGTGAGATAGAAGATAGACTTGCAAAGTTGATTATAGAGGGTCTTATACATGACGGACAGACTGCGTCTTTTGACC TGTCTGGGGGCGCTGTGAATGCCCAGGTGTGCTCCTGA Protein sequence : MCGGSFMSESQSELDKYGTNLTKTAATNKLDPVIGRDAEIRRVCQILSRRTKNNPVLIGSAGVGKTAIVEGLAQRIVAGD VPESLRNKEIVSLDLSALLAGASYRGEFEKRVKNLLEEIQKSKVIIFIDEVHTLMSAGAAEGAIAAGNMLKPLLARGELR LIGATTLDEYREHLEKDPALERRFQQVFVGEPNLEDCIAIMRGLKERYEAHHKVSISDTALVTAVELSSRYITGRQLPDK AIDLLDEAASSLRMEIDSSPVELDQLRREVDRLRLEELALKSENDPTSEQRLRSITNQLSGKQEMLNTLQASWNSERARL NQIGALKEQIDIAKQSADIAQREGRLEDASRLLYATIPQLQKNLAEKLEEQDSAPLVSDQVMPEDIASVVEGWTGIPVKK LMQKDAKQLLHLEEDLSKSVIAQKVAIGVIADAVRRSRAGLSDPNRPSGTFLFLGPTGVGKTQLVKALASLLYDGEIVRI DMSEYSEKFSISRLIGAPPGYIGHESAGQLTESVRRRPYSVVLFDEAEKAHPEVFDILLQVLDEGRLTDSHGRTVDFRNT IIVLTSNIGSRYLSDISLEATTAHEYVNDEVRRTFRPEFLNRLDEIVIFEPLSQSDICQIVDLNIESLNKRIKDRRIVVT VSEDLRRWLSKSGYDVIYGARPLRRLIQREIEDRLAKLIIEGLIHDGQTASFDLSGGAVNAQVCS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-90 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_787874.1 | ATP-dependent protase ATP-binding subunit | VFG2076 | Protein | 4e-107 | 42 |
| clpB | NP_787874.1 | ATP-dependent protase ATP-binding subunit | VFG2084 | Protein | 4e-95 | 41 |
