Gene Information

Name : TWT664 (TWT664)
Accession : NP_787792.1
Strain : Tropheryma whipplei Twist
Genome accession: NC_004572
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 776654 - 777508 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence : 
GTGATTGATTATCTACTTGCTCCTTTCGAGTACGGGTTCATGCTGCGTGCCTTTATTGTTGTCATTGTGTCAGCAACCCT
GTGCGGCCTCATATCGTGTTGGGTGGTTCTTCTTGGCTGGTCGATGCTCGGTGAGGCAATTTCACACGCGATATTTCCCG
GAGTTGTCCTAAGCTTCCTCCTTGGCGTGCCATTTGCCATTGGCGCTTTTGTATCCGGCCTTGTGGCAGTGTATCTAATC
GGCCACCTGAGAAGTAACCCTAGGATCAAAGAGGATGCTGCGATGGGTGTTGTGTTCATAACCATGTTCTCGCTTGGCCT
AATCTTAGTTTTCTTTATTCCAGGCAAAGGTCATCTTATGCATATATTGTTCGGCAACTTGCTAAGTGTTACATATCTGG
ATCTGTATCAGGTAATAATCCTTGGTGTGCTTGGGATATCGATCCTAACTTATAGGCGAAGGGATTTTACCCTGTACGCA
TTCGACCCCGGACACGCGAATGTCATTGGTATATCCACCAGATCACTTCACAATATATTTCTTATAACCCTAGCGTTCAC
AATTGTTGTCTCGGTACAGCAAGTCGGTGTGGTTCTTGTTGTTGCTATGTTGGTCATACCGGGCGTCTCGGCAAGTCTGC
TTAGCAGAAAAATATCAAGAATGTTTATCATATCTCCCGTCATGGCTGTTACAACTTCTGTAGCTGGTGTTTACATAAGC
TACACATTTGACTTACCACCGGGATCGGTGATTGTCTTGGTTATGGGATCAGTGTTCGTTCTCACATACACTGTAACGAG
TATCATGTCAATGATTGTGAGCAATAGAACTCTGTTGAGGACAAGACACGGGTAA

Protein sequence : 
MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI
GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA
FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS
YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-38 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-38 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-38 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-38 41
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TWT664 NP_787792.1 iron ABC transporter permease BAC0442 Protein 2e-41 45
TWT664 NP_787792.1 iron ABC transporter permease BAC0352 Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TWT664 NP_787792.1 iron ABC transporter permease VFG0528 Protein 1e-38 41