Gene Information

Name : TWT663 (TWT663)
Accession : NP_787791.1
Strain : Tropheryma whipplei Twist
Genome accession: NC_004572
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 775743 - 776573 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence : 
GTGAACCGGCAAGGTTGTGATGTGCTGAGAGGCTCCGTCCTGTCTGTCAGTGACTTGTCAGTGGTTTATGGCGACGTTGT
TGCTATGAGGGATGCAACATTTGAGGTTGCTTCAGGGGTTGTTTGTGGCATCATAGGGATGAACGGCTCGGGTAAGTCGA
GCCTATTCAACTCGATTGTTGGCAACGTAAGGCCAGCACGTGGTAGCATCTCGATATTTGGTCTTTCCCCCGTTGCCGCA
ATGAAACGGGGGATGGTAGCTTATGCCCCACAACGCGAATCAATTGACTGGAACTTTCCGATAAGTGTGCGTGAGGTGGT
TATGATGGGGCGATATGGTTTTATGTCATTGTCCCGAAGGGCGAGTCAAACTGATCGCGATAAGGTCACACAGGCCCTCG
AAATGACTGAACTTGTGGAGCTTGCAGATAGGCAAATTGGGCAACTCTCTGGAGGGCAGAAGAAAAGGGCATTTGTCGCG
AGGGCAATAGCACAGGGCGCCAAGCTGCTTCTCCTTGACGAGCCATTTGCCGGAGTTGATAAAAAGAGCGAGGGAATGAT
TGTGCAGCTTATTCGCCAGCTCTGTGAGAAGGGGTGCTGTGTTCTTGTTTCAACCCATGATCTAAACACTCTTCACGGGC
TGTGCAATGAGGCGATTCTTGTTAAAAACCGTATCTTGATGCACAACACGTGTGAGGTTGTTTTGCGTCCGAATAATCTC
GCCATGGCGTTTGGACTAGATCCGGGTTATGGAACAAGTAAGAATAACAACGATTTAAATACGTTTATATCCGCAACGAG
CGCAAATGGAGTCGCGGATGGTAGCAACTGA

Protein sequence : 
MNRQGCDVLRGSVLSVSDLSVVYGDVVAMRDATFEVASGVVCGIIGMNGSGKSSLFNSIVGNVRPARGSISIFGLSPVAA
MKRGMVAYAPQRESIDWNFPISVREVVMMGRYGFMSLSRRASQTDRDKVTQALEMTELVELADRQIGQLSGGQKKRAFVA
RAIAQGAKLLLLDEPFAGVDKKSEGMIVQLIRQLCEKGCCVLVSTHDLNTLHGLCNEAILVKNRILMHNTCEVVLRPNNL
AMAFGLDPGYGTSKNNNDLNTFISATSANGVADGSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-52 47
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-52 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-51 47
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-50 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-51 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TWT663 NP_787791.1 iron ABC transporter ATP-binding protein BAC0350 Protein 3e-51 47
TWT663 NP_787791.1 iron ABC transporter ATP-binding protein BAC0440 Protein 6e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TWT663 NP_787791.1 iron ABC transporter ATP-binding protein VFG0526 Protein 3e-51 47