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Name : TWT264 (TWT264) Accession : NP_787392.1 Strain : Tropheryma whipplei Twist Genome accession: NC_004572 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 348455 - 349318 bp Length : 864 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGGGGCTTGACAATTTAAAGGTAGGTCTTGCGCAAATGCTCAAAGGGGGCGTAATAATGGATGTTGTTACACCCGATCA GGCAAAGATAGCCGAGGATGCTGGCGCTGTTGCTGTTATGGCATTGGAAAAAATACCGTCTGATATTCGTGCTTCTGGTG GCGTGTCGCGTATGAGCGATCCCGGTTTGATTGAGCGGGTAATGGATTCAGTGTCAATTCCTGTTATGGCGAAAGTAAGG ATCGGTCATTTTGCCGAAGCGCAAATCCTTCAGTCACTAAAAGTTGATTACATAGATGAATCGGAAGTTTTGTCTGTTGC GGATTCTTCGTATCATATCGACAAACGAAAATTTACAGTTCCTTTTGTTTGTGGTGCGACCAATCTCGGCGAAGCCTTAC GTCGTATTTCGGAAGGCGCTTCTATGATCAGGTCAAAAGGGGAGGCTGGTACGGGCGATATTGCGCAGGCTACAAAACAT ATACGTGCTATCCTGTCTGAGATATCTGCGTTGACACAAGCGCGGGAAGATGAACTTCCTGCCAGGGCCAGGAAGCTCGG CGCGCCAATTGATCTTGTGCGAGAGACAGCCAGGCTTGGCAGATTGCCGGTTGTTTTGTTTACTGCCGGCGGCATTGCAA CACCAGCGGATTCTTCGCTTGTTATGCAGCTTGGATCTGACGGGGTATTTGTTGGTTCGGGAATTTTTAAATCTGAAGAT CCAAAAGCCTATGCCGCAGCAATTGTTCAGGCGACTGCTCAATACGATGATGCGGATCTCCTAGCCCGCGTGTCGCGTAA TTTAGGTCAGGCTATGCCCGGTGTTTCCAATCTTGATGTGCGTTTTTCGAATCGGGGTGTGTAA Protein sequence : MGLDNLKVGLAQMLKGGVIMDVVTPDQAKIAEDAGAVAVMALEKIPSDIRASGGVSRMSDPGLIERVMDSVSIPVMAKVR IGHFAEAQILQSLKVDYIDESEVLSVADSSYHIDKRKFTVPFVCGATNLGEALRRISEGASMIRSKGEAGTGDIAQATKH IRAILSEISALTQAREDELPARARKLGAPIDLVRETARLGRLPVVLFTAGGIATPADSSLVMQLGSDGVFVGSGIFKSED PKAYAAAIVQATAQYDDADLLARVSRNLGQAMPGVSNLDVRFSNRGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 5e-84 | 69 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 6e-84 | 68 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 6e-84 | 68 |
