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Name : hsdR (lp_0938) Accession : YP_004888888.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Unknown Product : type I restriction-modification system,restriction subunit Function : - COG functional category : - COG ID : - EC number : - Position : 868000 - 870873 bp Length : 2874 bp Strand : + Note : - DNA sequence : ATGATGGCAAGTGGACATCAATCTGAGGCAGAATTAGAAAATCACCTCATTCGAAAGTTACAAAGCATTGGCTATCATTA CGTTGAAATTCCCGATGTTGAAACGCTAAACACACATTTTCGTGCGGTCTTGAGTGAACGTAATCAAGAACGTTTAAAGG GAACACCACTGAGTGACCGTGAATTTCAGGCCGTATTAAATGATTTGATTGGCGCTAAGACGCATTATCAAGTTGCCCAA ATTTTACGTGGTTCGGTTGTTCAGCCAACTGGGAAAATTAATATTAAACGTGATGATGATAGCAGCTTATACCTAGAAAT TTTTAATGGAAAACAATTTGATCAGAATATTTTTGAAGTTAGCCATCAAATGACGGTTGAAGGTCGTCATGAGAACCGCT ATGATGTGCTGATCTTGATCAACGGGATGCCAATTGCCCAAATTGAGTTGAAGCGGCAAGGGGTTGAATTTACTCAGGCT TTTAATCAAATTATTCGCTACCGAACTGAATCGTACGCACAAGCAAAACTCATGCGACTGGTTCAGGTATTTGTCATTTC CAATGGCAATGAAACGCGGTATTTTGCGAATGGCGATGGTGAGTTAAATTCAAACTTCATGTTCTACTGGACGGATGAAC ATAATAATTGGTTGAATGACTTGGACGCTTTTACGACCACTTTCTTGAGTAAACCACGGTTACATAGTTTAATCGCAAAA TATACGGTGTTCGATAGTAGTGACCATAAAATGTTATTAATGCGGCCTTATCAAATATATGCCACTGAGGCAATTATTAA GCAAGCTATCGATCACCCCCATGAAAATGGTTATGTGTGGCACACGACGGGTTCCGGTAAGACGATTACCTCCTTTAAGG CCAGTCAGTTGTTATTACAAGAAACTGATGCTGAAAAGGTTATCTTCATGATTGACCGTGCCGACTTGGATATTCAGACG GTAAAGAATTTTAGTGCCTATCTGCCTGAAACAACTGGGGGCCAGAGTCCCTTGGATCGGACTGACAATACTGCTGCATT AGTCAAGCAGCTGTCCTCTAATGATAATGGCTTGATCGTGACGACCATTCAGAAGATGAATAATGCGGTCTCTAATGATC GGTATAAAGATATTCTGACACCGTACCATGACCGCAAAGTGATCTTCATTGAAGATGAAAGCCATCGTAGCCAGATGGGC GAAATGCGAAAAAACGTGAATCATTGGTTTAAGAATGCCCAACACTTTGGGTTCACTGGAACCCCGATTTTTCAACAGAA TATGGGACCCGATGGGCGGACCACAAAAGATCTGTACGGGAATCAGTTGCATCAATACTTGATTCGTGATGCAGTTCGTG ATGGTAACGTGCTTGGTTTTTCGATTCAGTATCTGTCGACCTTTGAGGAGACTGATCATGACATTACAGACGAACAAGTA CCAGGAATTGATACGCAAGAGGTCTATGAGTCCGAGGAGCGATTGACCAAGATTGTTGAGCATATCCTGTTGAACCATAG CCACATTACAAAGAATAAGCATTACAATGCAATCTTTACGGTAGCGAATACGCGCATGGCTTTAAAGTACTATCAGTTGT TTAGAAAGTTGGATCCTGATCATAATTTGAAGGTCACGACAATCTTTACGTGGGCTGCCAATGAGGACGACAACGAGGAA CACCAAAAACAGGATGATGTCACTTCACGGATGGGATTAGATCAAGTCGTGAAGGACTATAATCAAATGTACGGTACGGA TTTTTCAACGGATAAATTCAAAGATTATTTTGCGGATGTTTCTAAGCGGATGCGCGATCATAATGACCAAACGCCGACGG ATAATATTGATATTTTGATTGTTGTGAACATGTTCCTAACTGGGTTTGACTCCAAACGGTTGTCCACACTATACGTGGAT AAAAATTTGCAATGGCACGGTTTAATCCAAGCATTTTCTCGAACCAATCGTGTTGAGGGCAAACAAAAACCATTCGGAAA TATTATTGCTTATCGCAATATCAAAAATAAGACGGATGAGGCTGTAGCGTTGTTTTCAGACGGGGACAGTTCCGGCTTCT TAGCACCAGATTATGATGAATTAAAAGCTGAATTTACTGACAAGATTGGCCAATTACTGACGGTGACTCCGGATGTCCAG TCAGTGGACGACCTCTATAACCGAGGCGATGACGCACTATATGAGTTTGTGATGGCGTTTCGGGCGGTCCTCCGGGTATA TAATCGTATTCGCGTGTATGATGATTTTGAATGGGCGCAATATGAACCTGAATTTTCGGATCAGCTGATGGAAGCCTTTC GGGGCAAATATTTTACGGCGTATCAAACGATTTATCAACGCAAAACGCAGGAGCGCGTCTCAATATTAGATGACGTTGAC TTTGATATCAGTCTATTGGAGACTGATACCATCAATGTTGACTATATTGTGAACTTAATCTCAGGCATTGACTTAATGTC GTCGACCGAACGTAAGCAAGATATTCAGAAAATTGAACATTTGTTGGATAATGCGACCAATGACCAATTAAAGTCGAAGG TTGAATTGTTGGAACAATTTTTGAATGAAGTTTTGCCAACGCTCGATACAGACGATGATATCGGCATGTCGTTGAGTAAC TTTATGGCCGAGAGCCAGCGAGCTGCCATTAAGGGTTTTTCACAAGAACACCACCTTTCGGAAGACTTCGTTAACGAGCA GATTTCTGACTACAACTTCTACGGTAAGACCAAGGACAAAGAGATTATTGACAAGTTAAGTGCTAATGGGCTCGGCTTTC GAGAGAAACGGCAGGCCAAACGCGAGATTAAGGATTTTGTATCGACTATCGACCGAAAGTATTCACTAAGCTAG Protein sequence : MMASGHQSEAELENHLIRKLQSIGYHYVEIPDVETLNTHFRAVLSERNQERLKGTPLSDREFQAVLNDLIGAKTHYQVAQ ILRGSVVQPTGKINIKRDDDSSLYLEIFNGKQFDQNIFEVSHQMTVEGRHENRYDVLILINGMPIAQIELKRQGVEFTQA FNQIIRYRTESYAQAKLMRLVQVFVISNGNETRYFANGDGELNSNFMFYWTDEHNNWLNDLDAFTTTFLSKPRLHSLIAK YTVFDSSDHKMLLMRPYQIYATEAIIKQAIDHPHENGYVWHTTGSGKTITSFKASQLLLQETDAEKVIFMIDRADLDIQT VKNFSAYLPETTGGQSPLDRTDNTAALVKQLSSNDNGLIVTTIQKMNNAVSNDRYKDILTPYHDRKVIFIEDESHRSQMG EMRKNVNHWFKNAQHFGFTGTPIFQQNMGPDGRTTKDLYGNQLHQYLIRDAVRDGNVLGFSIQYLSTFEETDHDITDEQV PGIDTQEVYESEERLTKIVEHILLNHSHITKNKHYNAIFTVANTRMALKYYQLFRKLDPDHNLKVTTIFTWAANEDDNEE HQKQDDVTSRMGLDQVVKDYNQMYGTDFSTDKFKDYFADVSKRMRDHNDQTPTDNIDILIVVNMFLTGFDSKRLSTLYVD KNLQWHGLIQAFSRTNRVEGKQKPFGNIIAYRNIKNKTDEAVALFSDGDSSGFLAPDYDELKAEFTDKIGQLLTVTPDVQ SVDDLYNRGDDALYEFVMAFRAVLRVYNRIRVYDDFEWAQYEPEFSDQLMEAFRGKYFTAYQTIYQRKTQERVSILDDVD FDISLLETDTINVDYIVNLISGIDLMSSTERKQDIQKIEHLLDNATNDQLKSKVELLEQFLNEVLPTLDTDDDIGMSLSN FMAESQRAAIKGFSQEHHLSEDFVNEQISDYNFYGKTKDKEIIDKLSANGLGFREKRQAKREIKDFVSTIDRKYSLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 0.0 | 44 |
