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Name : tex (lp_0569) Accession : YP_004888569.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Unknown Product : transcription accessory protein, contains S1 RNA binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 526773 - 528944 bp Length : 2172 bp Strand : + Note : - DNA sequence : ATGGATAATCAGATTTTAACGTTAGTTAATCAAACGCTGACGAAGTTTAAACCGCAACAGATCAAAGCGGTTCTCGGACT CATGGACGAAGGCAACACCGTTCCGTTTATCGCACGGTATCGAAAGGAACGTACCGGTAACTTAGATGAAGTTGAAATTC GCGAAATTAAAGATAACTATGATCGGCTTGCGAGTCTAGAGAGTCGTAAGGCAGATGTGATGAAGTTGATCGCTGAACAA GATCACTTGACGCCGGCTTTAAAGCAAGCCATTGAAAAAGCTGACAAGTTGCAAGATGTCGAAGATTTGTACTTACCGTA CAAACAGAAGCGACGTACGAAGGCAACGATTGCGAAAGATGCTGGACTGGAGCCGTTAGCAGCTTGGTTATTACGTTTTC CGGCAAGTGGTATTCAGGAACACGCGGCGCAGTTTGTGAACGAAGCGCAGGACATCACAGACGCGAATACCGCGTTAGCT GGAGCTCACGAAATCTTGGCTGAGGCCTTTGGTGATAATGCCGGTTTACGAAACTGGGTCCGGAATTATACGCGTGACCG GGGCTTACTAGTCGCAAAAGTGAAACCCAAGGGTAAAGCAGCCGATGAACAAGGTGTTTACCAACAGTATTATGATTTTA ATAGTCCCATCAAGCAGATGGTACCGTACCGGGTACTGGCTATCAACCGTGGGGAAGCCGAAAAAGTATTGAAAGTCAGC ATTGATGTTGATCGTGCTGGAATTGACCGGTATTGTCATTTTCGTTTTATTGGTCAGCACCACGGCCCAGCGATTGAACT AGTAGAAGCTGCTTATCAGGATGCCTACAAACGCTTTATTGGCCCGGCCATCGAACGTGAACTTCGCAACGAATTGAGTG CGGCTGCCAATGAACAGGCCATCAAAGTCTTTGGCGATAATTTGTACCACTTATTAATGCAGGCACCATTAAAAGGTCGC GTGGTATTAGGGTTCGACCCCGCTTACCGGACGGGGTGTAAATTAGCCGTGATGGATGCGAATGGTAAGTTCTTAGATAA GCTTGTGATTTATCCACACAAACCAGCCCCAACTGCCAAACGGGAAGCTGCTGCGGGTGAGTTTAAAGCCTTTTTAGAGA AGTATCATGTTGAAATGATTGCGATTGGTAACGGGACGGCTTCCCGCGAATCCGAGGAGTTTGTGGCACAGGTATTGAAG ACTATGACCCGACCGGTTTATTATGTCATCGTTAACGAAGCCGGGGCTTCCGTGTACTCTGCTAGTGCTAAGGCGCGTGC TGAATTTCCTGAGCTACACGTTGAACAACGTAGTGCGATCAGTATCGGCCGGCGACTACAAGACCCACTGGCAGAATTGA TCAAAATCGATCCGAAGTCAGTGGGAGTGGGGCAATACCAACACGATGTGCCCCAGAAGGAATTGACAACGCAGCTAGAT ACGGTGATTGAGACCGCGGTTAACCAAGTTGGGGTCAATTTGAATACCGCTAGTTCGGAGCTATTGACGCATATTTCGGG GCTATCCAGCACGATTGCCCAAAATGTGATTACTTATCGGGATGAAAATGGCGAATTCACGAGCCGACCACAATTGAAAA AAGTGCCGCGGTTGGGACCGAAAGCTTATGAACAAGCGGTCGGCTTCCTGCGAATCATTGACGGCAAGAATGTTTTTGAT AACACGGATATTCATCCAGAAAGTTATCCCGCAGCCAAAGCGTTATTGGCAGCGGCTGGATTGAAGACGACGGACGTTGG GACGACTAAAGCCCAACAGTTGAATCAATTAGATTTAGCGCAACTTGCGACCAGCACCGGTGTCGGTGAACTGACCTTAA AGGATATTATTAGTAGTTTGCAAAAGCCCGGGCGTGATGTTCGTGATACGATGCCCGCACCGTTACTCCGGCAAGACGTT TTAAAGATGAGTGATCTAAAACCAGGGATGCAGTTGCAAGGAACCGTACGCAACGTGGTCGACTTTGGGGCGTTTGTGGA TATTGGTGTCAAGCAAGATGGCCTCGTACATGTCTCCAAACTAACGGATAAGTTCTTGAAAGATCCGCGTCAGGCGGTGG CAGTTGGCGACATCGTAACGGTGTGGGTCGAAGAAGTTGATGAACAGCGGCAGCGCATCGCTTTGACGATGATTGCACCG GCTGAAGCATAA Protein sequence : MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNYDRLASLESRKADVMKLIAEQ DHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKDAGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALA GAHEILAEAFGDNAGLRNWVRNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQAIKVFGDNLYHLLMQAPLKGR VVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAKREAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLK TMTRPVYYVIVNEAGASVYSASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGPKAYEQAVGFLRIIDGKNVFD NTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLAQLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDV LKMSDLKPGMQLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP AEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 8e-132 | 45 |
