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Name : lysS (lp_0550) Accession : YP_004888552.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Virulence Product : lysine-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 500766 - 502265 bp Length : 1500 bp Strand : + Note : - DNA sequence : GTGGCACGACAAGAACAGACGATGAACGACCAACTGAAGGTTCGTCGCGAAAAAATGGATGAACTGCGTGAAGAGGGGAT TGATCCCTTTGGTCACCGGTTCGAACGGACTGATTTAGCCCAGGACTTGCAAGACAAGTATGGGGATATGGATAAGGACG AGCTAGACGCTAAACAAGTGGTGGCAACCATTGCTGGACGGATGCTAGCTAAGCGTGGTAAGGGTAAAGTCGGTTTTGCT GATATCTGGGATCGCTCAGGTAAGATGCAGTTATACATTCGTAAAGATGTAGTCGGCGAAGATACTTACCATATCTTCAA GCGTTCTGATATTGGTGATTTCCTTGGAATTACCGGCCAAGTTTTTAAGACGGACTTTGGCGAATTAACGATTAAAGTAA CTGGTTTAACGTTCTTATCAAAGGCGTTACGACCATTGCCAGATAAGTTCCATGGGTTACAGAATGTGGAACAGATCTAT CGCCAACGGTATTTGGACTTGATCTCTAACCGCGATAGCTTTGATCGTTTCTTGAAGCGGACGAAGATCATTTCAGCGAT TCGGCATCATTTAGACGATCAAGGCTTCACAGAAGTTGAGACGCCAATGTTGCATAATCAAGCTGGTGGTGCGGCAGCAC GGCCATTTGTGACTCACCACAATGCGTTGAACATTGATCTCTACTTACGAATTGCGTTGGAATTACATTTGAAGCGCCTG ATCGTTGGTGGCATGGAAAAGGTTTATGAGATTGGTCGGGTTTTCCGTAATGAAGGGATGGACCGTGAACATAATCCTGA ATTTACCATGATGGAAACTTATGTCGCCTATTTCGACTTCCATGATGTAATGGCTGAGACGGAAGGTATTTTTAAAGCCG CAGCGCAAGCCGTAACTGACGATGGCATTGTCACTTATCATGATCAAAAAGTTGATTTCAATCAACCATTTAAGCAAATT CACATGGTCGATGCGATTAAAGAAAAGACTGGGATTGATTTCTGGCAACCAATGTCAATTGAAGATGCACAAAAATTGGC GGATGAACATCACGTGAAGTATGAACCATACTGGAAAGTTGGTCATATCATTAATGCGTTCTTTGAAGAATTTGTTGAAG ACACGTTGAATGAGCCAACCTTTGTTTATGGTCATCCAGTTGAAATTTCGCCATTAGCTAAGAAGAATGAAGAAGATCCA CGGTTTACTGATCGTTTTGAACTCTTCATCTTAGGTAATGAATACGCCAATGCGTTCAGTGAATTGAATGATCCAATTGA CCAACGGCAACGTTTCGAAGCTCAGGCTGCGGAACGGACTGCTGGTAACGACGAAGCTGAACATATTGATGAAGACTTTG TCGAGGCGTTGGAATACGGGATGCCGCCTACTGGTGGGTTAGGTATCGGGATTGATCGGTTGGTTATGTTAATGACGGAT GCGGATTCGATTCGTGATGTCTTACTTTTCCCAACGATGCGTCCAGAAGAAGATAAATAA Protein sequence : MARQEQTMNDQLKVRREKMDELREEGIDPFGHRFERTDLAQDLQDKYGDMDKDELDAKQVVATIAGRMLAKRGKGKVGFA DIWDRSGKMQLYIRKDVVGEDTYHIFKRSDIGDFLGITGQVFKTDFGELTIKVTGLTFLSKALRPLPDKFHGLQNVEQIY RQRYLDLISNRDSFDRFLKRTKIISAIRHHLDDQGFTEVETPMLHNQAGGAAARPFVTHHNALNIDLYLRIALELHLKRL IVGGMEKVYEIGRVFRNEGMDREHNPEFTMMETYVAYFDFHDVMAETEGIFKAAAQAVTDDGIVTYHDQKVDFNQPFKQI HMVDAIKEKTGIDFWQPMSIEDAQKLADEHHVKYEPYWKVGHIINAFFEEFVEDTLNEPTFVYGHPVEISPLAKKNEEDP RFTDRFELFILGNEYANAFSELNDPIDQRQRFEAQAAERTAGNDEAEHIDEDFVEALEYGMPPTGGLGIGIDRLVMLMTD ADSIRDVLLFPTMRPEEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-116 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004888552.1 | lysine-tRNA synthetase | VFG1668 | Protein | 2e-116 | 47 |
