|
Name : dexB (lp_3641) Accession : YP_004891110.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Unknown Product : glucan 1,6-alpha-glucosidase Function : - COG functional category : - COG ID : - EC number : - Position : 3259037 - 3260662 bp Length : 1626 bp Strand : - Note : - DNA sequence : ATGCAAGCACATTGGTGGCAACGCGCAACGGTTTATCAGATTTACCCACGTAGCTTTCAAGATAGTAACGGGGATGGAAT TGGTGACATCCCTGGGATTATCAGTCGGCTCGATTACTTGGCAACCCTTGGTGTGGATGCGCTGTGGTTAAGCCCGGTAT ACAAAAGTCCGAATACTGATAACGGCTATGACATTGCGGATTATCAGGCGATTGACCCAGCATATGGCACGATGGCCGAT ATGGATCAGTTGATCGCTCAAGCGGCTCAGCGTGGCATAAAAATCGTGATGGATTTGGTCGTGAATCATACCAGTGATGA GCATCTGTGGTTTGTGGATGCTTGTCAGAATCCAGATAGTCCGACGCGCGATTATTATGTATGGGCGGATGCTGTTGATG GGCATGCGCCTAATGATCTGACATCTGGTTTCAGTGGCGGTTCAGCTTGGGAGCTAGATGAACTAACGGGCCAATACTTT TTGCACTTGTTTTCAAAAAAGCAGATTGATTTGAATTGGCAGAATCCAGACTTACGACGCGCAATTTATCGTATGATGAA TTTCTGGATCGATAAGGGAATCGAAGGGTTTCGGATGGACGTCATAGATATGATTGCCAAGGAGCCACGTGCAAAAATTT TAGTGAATGGGCCGCATCTGCATGAATATTTACATGAAATGAATCGTCAGACTTGGCGGAACCGTGATTTTTTAACAGTC GGTGAAGCCTGGAGTGCAAGTCCAGAAGATGCGCGACAGTACAGTGATGAGCAGCGCGAAGAATTAAGTATGGTCTTCCA ATTCGGCCACTTATGGGCTGATCGCCAGGTTGGCGGCGAAAAGTGGGAACAGCGACCACTTGATGTTGCACAACTGAAAC AAGCGCTCTATGCTTGCCAAACGACGATGGCGACTCACGGGTGGAATAGTTTATTCTGGAGTAACCATGACCTGCCCCGC GCCGTTTCACGCTTTGGGGCTACGGGTCAGTACCGAGAGCTGAGTGCGAAGATGTTAGCCATTGCTTTACACGGACTAAA AGGCACACCTTTTGTCTATCAAGGGGAAGAGATTGGTATGACTGATTGCCCAGTTGCAACTATCGATCAAGTTAACGATG TTGAAGCCCGGACAATTTATCGACAATTACGAGCACAGGGTGATGATGCTGGTACCGCCATGCAGAAAATCAATATCTTT AATCGTGATAATGCGCGGACGCCCATGCAATGGACGGCTAAGCAACACGCGGGATTTACAACGGGCAAACCATGGTTGGC AATCAATGCCAATTATCCGAGGATCAATGTTGCGGCCGCCCAAGCGGACTACCAATCGATATGGTGGACGTATCAGCGGC TAATTAGATTACGCAAACAGTCGGCGGTGTTGCAACAGGGTGAGTTTACCGAGTTATCAGCGGTACCGGCACCAATCGTT GCCTACACTCGGACTTGGCAACAAACCCAATGGCTAATTTGCGCTAATTTTGCTGATACACTTATTACGGTAGATCTACC AAAGCGAGCATCTGAGTTAATCATCAGTAACTATCAAGATTATCCTGAGCAACTGGGGCGGGTGGTATTACGACCGTATG AAGCGTTTATCCTTGCATTAAGCTAG Protein sequence : MQAHWWQRATVYQIYPRSFQDSNGDGIGDIPGIISRLDYLATLGVDALWLSPVYKSPNTDNGYDIADYQAIDPAYGTMAD MDQLIAQAAQRGIKIVMDLVVNHTSDEHLWFVDACQNPDSPTRDYYVWADAVDGHAPNDLTSGFSGGSAWELDELTGQYF LHLFSKKQIDLNWQNPDLRRAIYRMMNFWIDKGIEGFRMDVIDMIAKEPRAKILVNGPHLHEYLHEMNRQTWRNRDFLTV GEAWSASPEDARQYSDEQREELSMVFQFGHLWADRQVGGEKWEQRPLDVAQLKQALYACQTTMATHGWNSLFWSNHDLPR AVSRFGATGQYRELSAKMLAIALHGLKGTPFVYQGEEIGMTDCPVATIDQVNDVEARTIYRQLRAQGDDAGTAMQKINIF NRDNARTPMQWTAKQHAGFTTGKPWLAINANYPRINVAAAQADYQSIWWTYQRLIRLRKQSAVLQQGEFTELSAVPAPIV AYTRTWQQTQWLICANFADTLITVDLPKRASELIISNYQDYPEQLGRVVLRPYEAFILALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-117 | 46 |
