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Name : lp_3540 (lp_3540) Accession : YP_004891018.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Virulence Product : PTS system, ascorbate-specific EIIC component Function : - COG functional category : - COG ID : - EC number : - Position : 3159329 - 3160699 bp Length : 1371 bp Strand : - Note : - DNA sequence : ATGAAGACTGTTTTGAACTTATTTGTTGGTATTGTGACCCAACCGTCTATTTTAGTAGCGCTAATTGCGATGTTAGGGCT ACTACTTCAAAAAAAGAAAAGTACGGAAGTTGTTCAAGGAACTATTAAGACCTTTGCCGGTTTCTTAGTCTTAACTGGTG GTGCCGGAATTCTTCAAAATGCATTGTCACCCTTTGCTTCCATGTTTAAGTTTGCGTTACATGTGCAAGGAGTTGTTCCT AGTAATGAAGCAGTTGTTGCAATTGCCCTGGTTAAATACGGCTCAACAACAGCACTAATTATGTTAGCTGGGATGATTGT TAATATTTTATTAGCTCGTTTTACTCGCTTTAAGTATATCTTCTTGACAGGGCAAGCAATGTTATATGTTTCTTGTTTAA CTGCAGTTATATTGGTAAGCGCTAACATTGGCACGGGTTGGCAAACGATTGTACTTGGTGGTCTATTTGAAGGGACATTA TTAACGGTAACACCAGCATTGACACAACCATTTATGCGTAAAATCACGGGTGGCGATGATGTTGCTATGGGACACACGGG TAACATTGGCTATGCGCTCTCAGGATTGATGGGTAAATGGTTTGGTAATGCAGAAAAGTCTACAGAGGATCTAGAAATCC CTAAGAGTTTGGGCTTTCTGCGTGATTCGACAGTTTCAATTACGATTTTGATGGGTATTGTCTACATTATTTTGGCGATT GTGACAGGTCCAGCTTACATTGAATCGAAATTGAGTGGTGGGACTAATTATATTGTTTATGCATTAGTACAAGCAGGAAC ATTTGCTGCCGGTTTCGTGGTTGTTTTACAAGGTGTTCGGATGATTTTGGCCGAAATTGTGCCAGCTTTTCAAGGTATTG CGACCAAGTTGGTTCCTAATTCTAAGCCTGCATTAGACGTTCCAATTATTTTCCCATACGCACCAAATGCAGTTTTATTA GGATTCTTTGTCAGTTTCATTGTTGGGACGCTAAGTATGTTTATCATGATTGCGCTAGGAACTACTGTTATTATTCCAGG TGTAGTGGGGCACTTCTTCTGTGGTGCTGCTGCAGCAATTTATGGTAATTCTACTGGTGGTCGGCGTGGTGCAATCATTG GCGCTACAGTAAATAGTTTGTTGATTAGTTGGTTGCCATTGTTTATTTTACCAGTTTTGGGAAGCTTGAAATTAGCAGCT TCAACGTTTGCAGATACCGACTATTTGGTTCCAGGAATCTTGTTAGGAAAATTAGGGAGTTACGGAAGTGTAGCAGTTAT TACAGGAATTATCTTGTTTACAATTATTGTGATTCTTTGCAGTATTTTTCTTACCCGGCGTGCTAAACGTATGACTGATG GAACTAAGTAA Protein sequence : MKTVLNLFVGIVTQPSILVALIAMLGLLLQKKKSTEVVQGTIKTFAGFLVLTGGAGILQNALSPFASMFKFALHVQGVVP SNEAVVAIALVKYGSTTALIMLAGMIVNILLARFTRFKYIFLTGQAMLYVSCLTAVILVSANIGTGWQTIVLGGLFEGTL LTVTPALTQPFMRKITGGDDVAMGHTGNIGYALSGLMGKWFGNAEKSTEDLEIPKSLGFLRDSTVSITILMGIVYIILAI VTGPAYIESKLSGGTNYIVYALVQAGTFAAGFVVVLQGVRMILAEIVPAFQGIATKLVPNSKPALDVPIIFPYAPNAVLL GFFVSFIVGTLSMFIMIALGTTVIIPGVVGHFFCGAAAAIYGNSTGGRRGAIIGATVNSLLISWLPLFILPVLGSLKLAA STFADTDYLVPGILLGKLGSYGSVAVITGIILFTIIVILCSIFLTRRAKRMTDGTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 1e-90 | 51 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 8e-91 | 51 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 8e-91 | 51 |
