Gene Information

Name : tkt4 (lp_3538)
Accession : YP_004891016.1
Strain : Lactobacillus plantarum WCFS1
Genome accession: NC_004567
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3156582 - 3158579 bp
Length : 1998 bp
Strand : -
Note : -

DNA sequence :
ATGTTTGATAAAGTTGATGAATTAGGTGTTAACACGATTCGTACACTTAGTATTGAAGCGATTCAGAAAGCTAACTCGGG
GCATCCAGGACTACCAATGGGAGCTGCACCAATGGCTTACGTACTATGGACGAAGCATTTAAATATTAATCCCAAGACTC
ACATGAATTGGGTCAATCGTGATCGATTTATTCTATCTGCGGGGCATGGTTCAGCTATGTTATATAGCCTGTTACATTTA
GCCGGGTATGATGTTTCGATTGATGATCTCAAGCATTTTCGGCAGTGGGACAGTCGGACTCCGGGGCATCCAGAGTATGG
ACATACCGATGGCGTTGAAGTAACTACTGGTCCGTTGGGACAAGGATTCGGTATGGCCGTTGGAATGGCAATGGCGGAGG
CACATCTAGCTGCCCAATATAACCGACCTAATTTTCCAATTGTTGATCATTACACTTATACAATTGTCGGTGATGGCGAC
TTAATGGAAGGAATTTCGCACGAAGCTGGTTCACTAGCTGGGCATCTTAAGCTGGGAAAGTTAATTGCACTTTACGATTC
GAACGGCATTTCATTAGATGGTAAGACGTCGCAAGCGTTTACTGAAAATGTTGGTGACAGGTTCACTGCTTATGGCTGGC
AGCATCTGGTGGTTGAAGATGGGAATGATCTTGATGCAATTGACGCGGCAATCGAACTTGCAAAAAAGACAACTGATCGT
CCTTCTTTGATTGAAGTGAAAACGGTGATTGGTTATGGCGCACCTAAACAAGGGACTAATGCTGTTCATGGTAACCCAAT
TGGTGCGGATGGCATTAAAGCAGCTGAAAAAGTATATGGCTGGAATTACTCGGATTTTGAAGTGCCGTCAGCTGTTTCAG
ACCGGTTTGAAGTAACTATTCAGGAAAATGGTGCGCGTGCTGAGCAGCAATGGAAACGGCTATTTGAAGAATATGAGGCG
AAGTATCCAGATCAGGCGCAGTCTTTTAAGCAAGCGTTCAACGGACAATTTTCTGATGACTTGAAATCTACTTTACCACA
CTATCAATTAACAGATGCATTGGCTAGTCGGGCGGCAAGCGCTAAGGCGATTAACGCTGCTGCCAAAGTAATACCTAGCT
TATGGGGTGGCGCAGCCGATTTGTCGAGTTCGAACAAAACAATGATTGCGGAAACATCAGACTTTCAACCAGAATCCTAC
GATGGTCGTAATATTTGGTTCGGCGTACGTGAATTTGGCATGGCGGCTGCGATGAACGGAATTGTATTACATGGCGGCAC
TCGGGTATTCGGGGGAACATTCTTTGTCTTCACTGATTACTTACGTGCGGCAGTCCGGTTGTCCGCACTGCAACACGCAC
CGGTTATCTACGTCTTAACGCATGATTCAATTGCGGTCGGCGAGGATGGGCCGACCCACGAACCGATTGAACAATTAGCT
AGTTTACGATGCATGCCGAACGTACAAGTGATTCGGCCAGCTGATGGTAATGAGACTTCAGCTGCGTGGGAGCAAGCACT
GAAAACAACTGATAAACCAACCGTTCTGGTATTGAGTCGACAAGCCTTGAAGACATTACCTGTATCAGTTGATACGGCCT
TTGCTGGCGTTGAAAAGGGTGGCTATGTGGTCAGTGCTGCTCAAAAAGAAATACCAGATGGTTTACTAATTGCGACTGGT
TCTGAAGTTAACTTAGCATTGGAGGCCAAAGCCCAGTTAGCAAAGCATAATCAAGATGTCGCGGTCGTTTCAATTCCGAG
TTTTGATCGGTTTGCGCAACAATCACCAGAATATCGCGCTAGTGTGCTTCCGAGCGCGGTCACAAGAAGGGTGACAATTG
AAGCTGGATCAACATTTGGCTGGGATCAGTATGCTGGCGATCATGGTGCTAAGATCGGTGTGGATCGCTTCGGCACTTCG
GCACCTGGTGACTTGGTACTTGATAAGTATGGTTTTAATGTAACTAATGTTGTGAATACTTATCTGAAATTAAAATAA

Protein sequence :
MFDKVDELGVNTIRTLSIEAIQKANSGHPGLPMGAAPMAYVLWTKHLNINPKTHMNWVNRDRFILSAGHGSAMLYSLLHL
AGYDVSIDDLKHFRQWDSRTPGHPEYGHTDGVEVTTGPLGQGFGMAVGMAMAEAHLAAQYNRPNFPIVDHYTYTIVGDGD
LMEGISHEAGSLAGHLKLGKLIALYDSNGISLDGKTSQAFTENVGDRFTAYGWQHLVVEDGNDLDAIDAAIELAKKTTDR
PSLIEVKTVIGYGAPKQGTNAVHGNPIGADGIKAAEKVYGWNYSDFEVPSAVSDRFEVTIQENGARAEQQWKRLFEEYEA
KYPDQAQSFKQAFNGQFSDDLKSTLPHYQLTDALASRAASAKAINAAAKVIPSLWGGAADLSSSNKTMIAETSDFQPESY
DGRNIWFGVREFGMAAAMNGIVLHGGTRVFGGTFFVFTDYLRAAVRLSALQHAPVIYVLTHDSIAVGEDGPTHEPIEQLA
SLRCMPNVQVIRPADGNETSAAWEQALKTTDKPTVLVLSRQALKTLPVSVDTAFAGVEKGGYVVSAAQKEIPDGLLIATG
SEVNLALEAKAQLAKHNQDVAVVSIPSFDRFAQQSPEYRASVLPSAVTRRVTIEAGSTFGWDQYAGDHGAKIGVDRFGTS
APGDLVLDKYGFNVTNVVNTYLKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-131 50
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 6e-130 47