Gene Information

Name : fhuC (lp_3104)
Accession : YP_004890662.1
Strain : Lactobacillus plantarum WCFS1
Genome accession: NC_004567
Putative virulence/resistance : Virulence
Product : iron chelatin ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2765055 - 2765849 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence :

GTGAATACCATTGAAGCCCAAAATATTAGTATTGGTTATGGCGACAAGGTTATCGTCGATCAGCTATCAATTACGATTCC
GCATGGTCAGATCACTACGCTGATTGGCCCGAATGGTAGCGGTAAATCGACCCTCATTCGTGCCATCGCCCACCTATTGC
CACCAACAACCGGCGTTATTCTACTGGATCATCAAAACATTCAACAAATCAAAAGCAAAACTTTTGCGAAAAAGATTGCA
GTCTTACCACAGACGAACCAAACGGCTAACGATCTCACCGTAGAAGAACTGGTGAGTTTTGGCCGCTTACCTTATCGGCG
GCCGTTAAGTGGGCTCACCACAACTGACCATCAAAAAATCGAATGGGCGCTCACTCAGGCCAGCCTCCAAGATTTACGCC
AACGGCCCCTAAGCACCCTTTCTGGCGGACAACGTCAACGGGCATGGATCGCCATGGCCGTTGCTCAAGATACTGACACG
ATTATTCTGGATGAACCCACCACCTACTTAGATTTGACTCACCAATTAGAAGTGATGCAACTCGTCAAAAAGCTCAACGA
ACAGGCCCACCGAACTATCATTATGGCATTACACGACTTGAACCACGCGGCTCGCATCTCTGACCAATTAATCGCGCTCA
AGGACGGTCACGTTTTGGCCCACGGTCCCGTGTCCACCGTCATGACGGCCGCTAATTTAAAAACAATTTTCAATATTGAT
GCCACCCTCGTTGACTACCACGGTACCCCACTGATTTTGACCTATAACGGCTGTCAGGAAGTGGCCCCCGCATGA

Protein sequence :

MNTIEAQNISIGYGDKVIVDQLSITIPHGQITTLIGPNGSGKSTLIRAIAHLLPPTTGVILLDHQNIQQIKSKTFAKKIA
VLPQTNQTANDLTVEELVSFGRLPYRRPLSGLTTTDHQKIEWALTQASLQDLRQRPLSTLSGGQRQRAWIAMAVAQDTDT
IILDEPTTYLDLTHQLEVMQLVKKLNEQAHRTIIMALHDLNHAARISDQLIALKDGHVLAHGPVSTVMTAANLKTIFNID
ATLVDYHGTPLILTYNGCQEVAPA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	6e-52	44
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	6e-52	44
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	2e-51	43
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	1e-49	43
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	2e-48	43
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	2e-48	43
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	2e-48	43
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	2e-48	43
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	6e-50	42
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-51	41
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-51	41
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-51	41
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	4e-51	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fhuC	YP_004890662.1	iron chelatin ABC transporter, ATP-binding protein	BAC0164	Protein	3e-50	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fhuC	YP_004890662.1	iron chelatin ABC transporter, ATP-binding protein	VFG1042	Protein	3e-50	42