Gene Information

Name : lp_2823 (lp_2823)
Accession : YP_004890434.1
Strain : Lactobacillus plantarum WCFS1
Genome accession: NC_004567
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2517057 - 2517737 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTCAACCAGTTTTAGCCTTACAAAATATTAATAAACAATTTGGTCACGGTCATACTGCTGTTAACGCCTTGACCGA
TGCCAATTTCGAAGTCAGTGCTGGCCAATTCGTCGCGATTATCGGTCCCTCTGGCTCAGGTAAATCCACCTTTTTGACGA
TTGCGGCCGGTTTACAAACGCCAACAAGTGGTCAAGTTATTCTGAACGGACAACCACTATCGAATCAAACGGAAAAACAG
CGCTTAGCCTACCGTTTCAATGAAATTGGCTTTATCTTGCAGAGTTCCAATCTGATTCCATTCCTGACGGTTCGTGAACA
GTTCAAGCTCGTCGATAAAATGGCCCGGCGCAAATTTGATCAAGCCGGCACCGATGAATTACTAGCAGAGTTAGCCCTTA
CTGAAGTTCGGGACGCCTACCCGAGTGACCTCTCTGGTGGTGAACGCCAACGTGTTGCCATCGCCCGCGCTCTTTACAAT
GATCCGAGCGTCATTCTCGCAGACGAACCGACCGCCAGCCTGGACACGCCCCGCTCCATCGACGTCGTCAAGCGCCTCGC
CAACGAAGCTCATCAGCACCAAAAGGCCATCGTAATGGTGACCCATGACCAACGGCTGATTGATGACTGTGACGTGGTCT
ATCAAATTGAAGATGGTAAGATGAGTCGCCGCGACTCGTAG

Protein sequence : 
MSQPVLALQNINKQFGHGHTAVNALTDANFEVSAGQFVAIIGPSGSGKSTFLTIAAGLQTPTSGQVILNGQPLSNQTEKQ
RLAYRFNEIGFILQSSNLIPFLTVREQFKLVDKMARRKFDQAGTDELLAELALTEVRDAYPSDLSGGERQRVAIARALYN
DPSVILADEPTASLDTPRSIDVVKRLANEAHQHQKAIVMVTHDQRLIDDCDVVYQIEDGKMSRRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-40 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-45 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lp_2823 YP_004890434.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-32 42
lp_2823 YP_004890434.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-27 42