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Name : ISP2_3 (lp_2006) Accession : YP_004889768.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1811513 - 1813165 bp Length : 1653 bp Strand : - Note : - DNA sequence : ATGCAAGATTATTATAACATGAATCAAACCACTTTGAGTATCGCCTTGGATTACCAACCAGAAGAGCATCATTCTGCTCG TTACATCAACCAGCTTGTTGAGAGTTTAAAACTAAAATATGTTTACCAGTTTGGCCGTCCGCGGGAATATAACCTCGGTA CCATGTTAAAACTGGTCCTTTTAGCGTACAGCTATGGCATTTTCAGCAGTCGTAAAATTGAACGGTTTGCCCGTGAAAAC AAGCCAGCTGGGTGGTTAATTGCCGACCAAATTCCGTCCTACCGGACGATTTGTCGCTTTAGAATTTCTGATGAACTGGC CACTTTGACAACCGATAGCTTATCACAACTAACTCAATATCTTCGTCAAAATGGCATGATTGATGATGTTTCATTTATTG ATGGAACTAAGATCCTAGCCGACGCCAACAAGTATAGTTTTGTTTGGAAGAAGAATACGATACGATTTGACAAGATGAAT CGCGAGAAACTCGTTGACCTGTTAGGCGAGCTTCATGAAGCTAAAATTGTCGGTGAAATTCCGGCAGGATCAGAGCTGAC TCCCGAACTATTGGATATCATGATTAGCAAGGTTGAGGATCACTTAGTGGTCCTTAATGAAACCGTGGAAGCAACTAAGC AGGTTTCCCCGAACCCAGCCAAACAGCAACGCCGGACTGTTAAATCACAAAAACGTAAGTTGGACAAACGACGTGATAAA ATGCGTGAACACCAAGCACAACAAGCAATCTATGGTCAGCGTAACAGTTACTCTAAGACGGACTATGATGCTACCTTCAT GCGGGTCAAGGAAGATCCGATGCAAAACGGTCAATTAAAACCTGCCTACAACGTTCAAATCGCCACGAGTAATCAGTTCA TTACGGGATATCGGCTTTTCCCAAATCCAACCGACACACGAACCTTACAATCGTTTATTGAACATTTAAAGGCCAACAAT GTGTTAGGTCACACCATCGTTGCCGATGCCGGATACGGTTCCGAAAGTAATTATCGGTACTTGGAAGATGAATTCGGTCA GCATACCGTTTTGATTCCCTACGGCACAATGCTTAAAGAGAATAGTCGAAAATGGCAAAGTGATGACCGTAAGGTTATGA ACTGGGACTATCATGAAAAAGATGATTATTTTATCAATCCACAAAACGTCCGGTTTAATTTTAATGCTTATCGTCAACGG ACTGATAAGTATGGTTTTACCCGTGACTTTAAAGAATACATTGCCGAAAAGTATGATGAAAATCATCAACTAATTTCCGC GGCACTAACACCAAAAGGATATCTTAAAAGGATTTCCGTGAACGAAAATTGGGAATATTTCAAATCGAAACAACGAGAAT TACTTTCATCTCCAGAAACTGGTCAGATTTACGCTCAACGTAAGATCGATGTTGAGCCAGTTTTTGGCAAGATGAAGGCT TCTTTACATTTCAATCGATTCTCGGTGCGAGGTTTCGACAAGGTCACCAAGGAAGCCGGAATCGTAATACTGGCGTTAAA TATTATGAAACTGGTCACGGTAGGGACCAACTTTAAAAATCAAAGGCGTAAGCGAATGGGACGAGAAACCAAAATTCGGT TTCTCGTCCCATTCGCTTATACAGAGGCTAGTTATGTCACAGCCTCATCTTAA Protein sequence : MQDYYNMNQTTLSIALDYQPEEHHSARYINQLVESLKLKYVYQFGRPREYNLGTMLKLVLLAYSYGIFSSRKIERFAREN KPAGWLIADQIPSYRTICRFRISDELATLTTDSLSQLTQYLRQNGMIDDVSFIDGTKILADANKYSFVWKKNTIRFDKMN REKLVDLLGELHEAKIVGEIPAGSELTPELLDIMISKVEDHLVVLNETVEATKQVSPNPAKQQRRTVKSQKRKLDKRRDK MREHQAQQAIYGQRNSYSKTDYDATFMRVKEDPMQNGQLKPAYNVQIATSNQFITGYRLFPNPTDTRTLQSFIEHLKANN VLGHTIVADAGYGSESNYRYLEDEFGQHTVLIPYGTMLKENSRKWQSDDRKVMNWDYHEKDDYFINPQNVRFNFNAYRQR TDKYGFTRDFKEYIAEKYDENHQLISAALTPKGYLKRISVNENWEYFKSKQRELLSSPETGQIYAQRKIDVEPVFGKMKA SLHFNRFSVRGFDKVTKEAGIVILALNIMKLVTVGTNFKNQRRKRMGRETKIRFLVPFAYTEASYVTASS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 5e-74 | 45 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 2e-75 | 45 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 1e-75 | 45 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 2e-75 | 45 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 2e-75 | 45 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 4e-58 | 41 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 3e-69 | 41 |
