|
Name : rrp5 (lp_1544) Accession : YP_004889380.1 Strain : Lactobacillus plantarum WCFS1 Genome accession: NC_004567 Putative virulence/resistance : Virulence Product : two-component system response regulator Function : - COG functional category : - COG ID : - EC number : - Position : 1410351 - 1411037 bp Length : 687 bp Strand : + Note : - DNA sequence : ATGAGTCGAATATTAATTATTGAGGATGAAAAAAACCTCGCACGCTTCGTTGAATTAGAATTAAAACACGAAGGCTATGA TATTCAAGTCGAATATAACGGCCGTAAAGGGTTAGACGCAGCGTTAGCTGAAGATTTTGATGCCATCCTATTAGACCTGA TGTTACCAGAACTGAACGGTTTGGAAGTCTGCCGGCGGGTTCGTGAAGTCAAGAACACGCCGATTATTATGATGACGGCC CGTGACTCCGTGATTGATCGAGTTTCCGGCCTGGATCATGGGGCAGATGATTACATTGTTAAGCCATTTGCTATCGAAGA ATTACTTGCCCGCTTACGAGCACTATTGCGGCGAATCGATTTGGAAAGTGAACAACAAAGCACTAAACAAACGACCGTCA CTTATAAAGACTTGACGATTGAAAAGGAAAACTTAGTCGTTAAACGCGGCGACGAAGTCATCAACTTGACGAAGCGTGAA TATGAACTGTTATTAACTTTAATGGAAAATATTAACGTTGTCCTCGCTCGTGATGTCTTACTAAACAAAGTATGGGGTTA CGAATCAGAAGTTGAAACGAATGTCGTCGACGTTTATATCCGTTACTTACGGAACAAGATTGACCGACCAGGAGAAAAGA GTTACATCCAAACTGTTCGTGGGACTGGATACGTGATTCGTTCTTAA Protein sequence : MSRILIIEDEKNLARFVELELKHEGYDIQVEYNGRKGLDAALAEDFDAILLDLMLPELNGLEVCRRVREVKNTPIIMMTA RDSVIDRVSGLDHGADDYIVKPFAIEELLARLRALLRRIDLESEQQSTKQTTVTYKDLTIEKENLVVKRGDEVINLTKRE YELLLTLMENINVVLARDVLLNKVWGYESEVETNVVDVYIRYLRNKIDRPGEKSYIQTVRGTGYVIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 3e-33 | 41 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 8e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rrp5 | YP_004889380.1 | two-component system response regulator | HE999704.1.gene1528. | Protein | 3e-79 | 77 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_013450.8614146.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_002951.3238224.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_007793.3914065.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_002758.1121390.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_010079.5776364.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_002952.2859858.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_007622.3794948.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_003923.1003417.p0 | Protein | 2e-52 | 56 |
| rrp5 | YP_004889380.1 | two-component system response regulator | AE015929.1.gene1106. | Protein | 7e-47 | 53 |
| rrp5 | YP_004889380.1 | two-component system response regulator | BAC0125 | Protein | 3e-31 | 43 |
| rrp5 | YP_004889380.1 | two-component system response regulator | BAC0308 | Protein | 6e-32 | 42 |
| rrp5 | YP_004889380.1 | two-component system response regulator | NC_012469.1.7686381. | Protein | 5e-36 | 42 |
| rrp5 | YP_004889380.1 | two-component system response regulator | AE000516.2.gene3505. | Protein | 9e-34 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rrp5 | YP_004889380.1 | two-component system response regulator | VFG1390 | Protein | 6e-39 | 43 |
| rrp5 | YP_004889380.1 | two-component system response regulator | VFG0596 | Protein | 1e-33 | 41 |
