Gene Information

Name : ctp52 (pE88_52)
Accession : NP_783823.1
Strain :
Genome accession: NC_004565
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 59451 - 60158 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
TTGAGTTACATACAACTAATAGATATTGTAAAAGAATATGGAGATAAACAAGAAATTGTACATGCTTTAAATAAAATTAA
TATTAATATAGAAAAAGGTGAAATGATTGCTATTTTAGGTACATCAGGTTCAGGAAAATCAACATTATTAAACTTAATTG
GATGTTTAGATAAAAGTACTAGTGGCAAATACATATTTGATAGTAAGGATATTACAAAGTGTAATGATAAAGATTTATCT
ATAATAAGAAATACTAAAATAGGATTTATATTTCAAACATTTTCTTTGATAACAGAATATAATGTTATAGAAAATGTTGA
ACTTCCTCTTTTGTATAGGAATTTGCTTTTAGGTAACACCAAAAAATTAGACAACCATGAAATTAAAAATCTAGCATTAA
AATATTTGAAAAAAGTTGGCATGGATAAGTATATTAATAAAAAAGTTACCAAGTTATCTGGTGGCCAACAACAAAGGGTG
GCAATAGCAAGGGCTTTAGTTAATGAACCTGATATAATTTTGGCAGATGAACCAACAGGTTCTTTAGATAAGAAGAACAG
TTTTAATATCATTAATATATTAAAAGATATTAATAATACTAACAATACTACTGTAATAATAGTTACTCATGATGAGGAAA
TCGCTAAGTTATGCAAAAAAATTATTAGAATAGAAGATGGGATTATTATTGAATCAATTTCTCTATAA

Protein sequence : 
MSYIQLIDIVKEYGDKQEIVHALNKININIEKGEMIAILGTSGSGKSTLLNLIGCLDKSTSGKYIFDSKDITKCNDKDLS
IIRNTKIGFIFQTFSLITEYNVIENVELPLLYRNLLLGNTKKLDNHEIKNLALKYLKKVGMDKYINKKVTKLSGGQQQRV
AIARALVNEPDIILADEPTGSLDKKNSFNIINILKDINNTNNTTVIIVTHDEEIAKLCKKIIRIEDGIIIESISL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctp52 NP_783823.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-31 47
ctp52 NP_783823.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-33 45
ctp52 NP_783823.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-33 43