|
Name : thiC (CTC00828) Accession : NP_781489.2 Strain : Clostridium tetani E88 Genome accession: NC_004557 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 877273 - 878589 bp Length : 1317 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATTATACAACTCAAATGGATGCTGCTAAAAGAGGAATAGTTACCAAGGAAATGGAAACTATAGCTAAAAAAGAAGG CATAGATGTAAAAAAAATAATAGAATGTGTAGCAAAAGGTAGTGTTGCTATACCTGCAAATAAAAATCATAAAAGTTTAA GTGCCGAAGGAGTAGGACAAGGGCTAAGAACTAAAATAAATGTAAATCTAGGTATATCAAAAGATTGTTGTAATGTAGAT AGAGAACTTGAAAAAGTAAAAAAAGCTATAGATATGAAGGCTGAAGCCATAATGGATTTAAGTTGTTTTGGAAAGACACA AGAATTTAGGAAAAGATTAATAGAAATGTCACCAGCCATGATAGGAACTGTTCCAATGTATGATGCTATTGGATTTTATG ATAAAGAGTTAAAAGATATTACCGCAGAAGAATTGCTAGATGTAATAGAAACTCATGCAAAAGATGGAGTAGACTTTATG ACTATCCACGCAGGACTTAACAGAGAAGCTGTGGAAATATTTAAGAGAAATGAAAGACTTACTAACATAGTATCCAGAGG AGGGTCTCTTCTTTATGCATGGATGGAACTTAATAATAAGGAAAATCCTTTCTATGAACATTTTGATAAAGTACTCGATA TATGTGAAAAATATGATGTTACAATAAGCTTAGGAGATGCTTGTAGACCAGGTTCAATACATGATTCTACAGATGCAAGC CAAATAAAAGAACTTATGACTTTAGGGGAATTAACTAAAAGGGCATGGGAAAGAAATGTTCAAATTATAATAGAAGGACC TGGACACATGTCCTTAGATGAAATAGAAACAAATATGAAATTAGAAAAAAAATTATGTTATAATGCACCTTTTTATGTAT TGGGGCCTATAGTTACAGATATAGCTCCTGGATATGATCATATTACAAGTGCTATAGGAGGAGCAATTGCTGCAACTTAT GGAGCAGACTTTTTATGCTATGTAACTCCAGCAGAACACTTAAGACTTCCTGATTTAGATGATATGAAAGAAGGTATAAT AGCAACTAAAATAGCAGCTCATGCAGCAGATATTGCTAAAGGAATAAAAGGGGCAAGAGAATGGGATAATAAAATGTCCG TTGCAAGAAAAGAGTTAGATTGGGAAAAGATGTTTGATTTGGCTATAGATAATGAGAAGGCAAGAAAGTATAGAAAGAAT TCAACACCAGAGGTTAACGATAGTTGTACAATGTGTGGAAAAATGTGTGCTGTTAGAAATATGAATAAGGTTATGCAAGG AAAAGATATAAATATATTGAGAAACGAGGATAAATAA Protein sequence : MNYTTQMDAAKRGIVTKEMETIAKKEGIDVKKIIECVAKGSVAIPANKNHKSLSAEGVGQGLRTKINVNLGISKDCCNVD RELEKVKKAIDMKAEAIMDLSCFGKTQEFRKRLIEMSPAMIGTVPMYDAIGFYDKELKDITAEELLDVIETHAKDGVDFM TIHAGLNREAVEIFKRNERLTNIVSRGGSLLYAWMELNNKENPFYEHFDKVLDICEKYDVTISLGDACRPGSIHDSTDAS QIKELMTLGELTKRAWERNVQIIIEGPGHMSLDEIETNMKLEKKLCYNAPFYVLGPIVTDIAPGYDHITSAIGGAIAATY GADFLCYVTPAEHLRLPDLDDMKEGIIATKIAAHAADIAKGIKGAREWDNKMSVARKELDWEKMFDLAIDNEKARKYRKN STPEVNDSCTMCGKMCAVRNMNKVMQGKDINILRNEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-59 | 45 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-59 | 45 |
