Gene Information

Name : CTC00485 (CTC00485)
Accession : NP_781177.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 490775 - 491491 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
GTGATTATAAAACTTGAAGACATTGAAAAAATTTATGATACAGGAGCCATTAAACTAAAAGCCCTAAATAAAATAAATTT
ATCTATTGATGAAAAAGAATTTGTAGCTATAATGGGTGCTTCAGGCTCTGGAAAGTCCACCATGATGAATATATTAGGTT
GTTTAGACAATATATCTTTTGGGAAATATTATTTAGATGGTGTGGACATTTCCTCACTAGACAGTAATGAGTTAGCAGCA
ATAAGAAATAAGAAAATAGGTTTCGTATTCCAAGCATTTAACCTACTGCCAAAACTTACTTCTATAGCTAATGTTGAATT
GCCTATGATGTATGCCGGAGTACCTAAAGAGGAAAGAAAAATTAAAGCTCAAAAAGCATTAGAAAGAGTGGGACTTGGAG
ATAGGATATATCATAAGCCTACAGAATTATCTGGAGGTCAAAAGCAAAGAGTTGCCATAGCCAGAGCTTTAGTAAATGAT
CCTTCTATATTATTAGCAGACGAGCCTACTGGAAATTTAGATAGTAAATCAACAGTAGAAATTATGGGGATTTTTCAGGA
GCTAAACAATGAAGGAGTTACAATCGTTATGGTTACTCATGAAGATGATGTGGCAATGCATACTAAAAGAGCAGTAGTTT
TTAAGGATGGAAACATAATTTCAGATAAATTAATAAATGAAAGTGAAAGAATTATAGTTGGGGGGCAGAAAGTATGA

Protein sequence : 
MIIKLEDIEKIYDTGAIKLKALNKINLSIDEKEFVAIMGASGSGKSTMMNILGCLDNISFGKYYLDGVDISSLDSNELAA
IRNKKIGFVFQAFNLLPKLTSIANVELPMMYAGVPKEERKIKAQKALERVGLGDRIYHKPTELSGGQKQRVAIARALVND
PSILLADEPTGNLDSKSTVEIMGIFQELNNEGVTIVMVTHEDDVAMHTKRAVVFKDGNIISDKLINESERIIVGGQKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC00485 NP_781177.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-58 55
CTC00485 NP_781177.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-47 46
CTC00485 NP_781177.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC00485 NP_781177.1 ABC transporter ATP-binding protein VFG0869 Protein 6e-21 41