Gene Information

Name : CTC00394 (CTC00394)
Accession : NP_781093.1
Strain : Clostridium tetani E88
Genome accession: NC_004557
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 387847 - 388617 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAGTTTTAAAAGTTGAAAATATAACAAAAATATATGGCGGAAAAAAGGGAGGACCAGTATTTAAAGCTCTAGATAG
ATTTAGTTTAGAAATTAAAAAAGGTGAATTTGTTGGAGTAATGGGGCCATCTGGCAGTGGTAAAACAACATTATTAAATA
TAATGGCAACTATAGATACTCCTTCATCAGGAGAGCTTTTTATAAATGGTACAAATCCTACAAAATTAAATGAGAAAAAT
ATTGCTCTCTTTAGAAGAAAAGAACTTGGATTTATATTTCAAGATTTTAATCTATTAGACTCCTTATCTATTAAAGAAAA
TATAATATTGCCACTTGTTTTAGAGAAGGTTAAAGTAAGAGAAATAGAAAAGAGAGTGGAAGATATTGCAAGCCTTTTAA
ATATTAAAGATATTTTAAATAAAAAACCCTATGAAATTTCAGGAGGGCAACAGCAAAGAGCTGCCTGTGCTAGAGCACTT
ATTCATAATCCTTCTATAATTTTGGCAGATGAGCCTACAGGAAATCTTGATTCTAAAGCTTCCCAAGATGTTATGGAGAC
TTTAACAAACCTAAATAGCAAAAAAGAAGCTACTATAATGATGGTTACCCATGATCCTTTTTCTGCAAGTTTTTGTAAAA
GGATAATTATGATTAAGGATGGAAAATACTTTTTAGAAATTGTGAATGGAGGAAACAGGCAAACATTTTTTAAAGAAATT
ATGGATTCTCTTTCACTTTTAGGAAGTAGATCAAATAATTATACACTGTAG

Protein sequence : 
MSVLKVENITKIYGGKKGGPVFKALDRFSLEIKKGEFVGVMGPSGSGKTTLLNIMATIDTPSSGELFINGTNPTKLNEKN
IALFRRKELGFIFQDFNLLDSLSIKENIILPLVLEKVKVREIEKRVEDIASLLNIKDILNKKPYEISGGQQQRAACARAL
IHNPSIILADEPTGNLDSKASQDVMETLTNLNSKKEATIMMVTHDPFSASFCKRIIMIKDGKYFLEIVNGGNRQTFFKEI
MDSLSLLGSRSNNYTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTC00394 NP_781093.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-37 48
CTC00394 NP_781093.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-37 46
CTC00394 NP_781093.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-36 45