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Name : capD (CTC02268) Accession : NP_782812.1 Strain : Clostridium tetani E88 Genome accession: NC_004557 Putative virulence/resistance : Virulence Product : capD protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2390784 - 2392625 bp Length : 1842 bp Strand : - Note : - DNA sequence : TTGAATAAAAGTAAGAAGCTTATAATTTATGATATTATATTATTAGTTTTGGCTCTATACTTATCTTTATTGTTAAGATT AGATTTTATAATATCCAATGAGTATATGGAATTTTTTAAATATGCTGTTGTTCCAGTGATTCTAATAACTTTATTTTTTA ATAAAATGTTCAAATTGTATGATAGTATTTGGAAATATGCCTCCATTGAAGAGCTTATTTCTATAATTTACTCACTATCT TTATCTAATGTGGTAATTATATTATATAATTATTTTGTTACATATAAATTATTAGAAACTAAGTATATGAGATTTCCTTA TGCTGCTCATATTATATTTTGGATATTATCTGTAGCATTTTTAGGAGGAACAAGATTCTTATATAGAGTGGTTGGTGAAA TACAGTCAGATAAAATTTGTAATAAAAAGAAAAATAAATTACTTATAATAGGTGCAGGTGATGCTGCGGCACTATTGATA AAAGAGATAAAAAAGAATACAAATTTAAATTATGAAATAATAGGGCTTATAGATGATAATGAAGAGAAAATTGGAAAGAC TATAAATGGAATAAAAGTAATAGGAAGTAGAAGAGATATTATAAATATTTCTGAAGAAAAAAAGATAGAAGAAATAATAC TAGCTATTCCATCTGTAGATGCAGGAACTAAAAGAGAAATAATCAACATTTGTAAAAATACTAAAGCTAAGTTAAAAACT CTTCCAGGAATATATGAAATAATAGATGGAAAAGTAAGTATTAGCAAAATAAGGGATGTAAGCATTGAAGATTTGCTTGG TAGAGAAGAAGTTAAATTAAATAATGATGATATAAATAAATACATAAAAGATAAAGTAGTATTAGTTACTGGAGGAGGAG GTTCTATTGGTTCAGAATTATGTAGACAAATTACAAAGTTTAAACCAAGAAAGCTTTTAATTCTGGACATATATGAAAAT AATGCTTATGACCTCCAAATGGAATTAAATTATAGTAATCCAAACTTAGACAAAGAAGTAATAATAGCCTCTATTCGTGA AGAGGAGAGATTAAGAGAAATATTTGAAAAATACAAGCCGGAAGTTGTTTTTCATGCAGCTGCTCACAAGCATGTGCCAT TAATGGAAAATAATCCAGCAGAAGCTGTGAAAAATAATATAATAGGTACATATAATTTGGTTAAATGCTGTCATGAATAT AAAGTGAAAAAATTTGTGCAAATAAGTACAGATAAGGCTGTAAATCCTACGAATATAATGGGAGCGACTAAAAGGTTCTG TGAAATTATGATACAAGCTTTTGATACAGTAAGCGAAACAGAATATGTGGCAGTTAGATTTGGAAATGTTTTGGGAAGTA ATGGATCTGTTATACCGCTATTTAAAAAACAAATAGCTCACGGTGGACCAGTAACAGTAACCCATCCTGAAATAAATAGA TATTTTATGACTATACCAGAAGCATCTCAATTGGTAATTCAAGCAGGAGGTATGGCAAAAGGTGGGGAAATATTTGTACT AGATATGGGGGAACCAGTAAAAATAAATGATTTAGCAAGAGATTTAATAAGACTTTCAGGATATGAACCAGATATAGATA TAAGAATAAAATACACTGGATTAAGGCCTGGAGAAAAATTATATGAAGAACTTCTAATGGATGAAATTGCATTAACTAAT ACAGAACATGATAAAATATATGTGGAAAAGCCTACAGAAAATAGTATGAAGTTTGTAGAAGAATCTATTAATGAATTTAG ATATGTAGTCCATAAGGACAGGGAAAGTATTTTTAAGCTAATGGAAATAAAAGTACCAACCTACAAAAGAAAAACAAATT AG Protein sequence : MNKSKKLIIYDIILLVLALYLSLLLRLDFIISNEYMEFFKYAVVPVILITLFFNKMFKLYDSIWKYASIEELISIIYSLS LSNVVIILYNYFVTYKLLETKYMRFPYAAHIIFWILSVAFLGGTRFLYRVVGEIQSDKICNKKKNKLLIIGAGDAAALLI KEIKKNTNLNYEIIGLIDDNEEKIGKTINGIKVIGSRRDIINISEEKKIEEIILAIPSVDAGTKREIINICKNTKAKLKT LPGIYEIIDGKVSISKIRDVSIEDLLGREEVKLNNDDINKYIKDKVVLVTGGGGSIGSELCRQITKFKPRKLLILDIYEN NAYDLQMELNYSNPNLDKEVIIASIREEERLREIFEKYKPEVVFHAAAHKHVPLMENNPAEAVKNNIIGTYNLVKCCHEY KVKKFVQISTDKAVNPTNIMGATKRFCEIMIQAFDTVSETEYVAVRFGNVLGSNGSVIPLFKKQIAHGGPVTVTHPEINR YFMTIPEASQLVIQAGGMAKGGEIFVLDMGEPVKINDLARDLIRLSGYEPDIDIRIKYTGLRPGEKLYEELLMDEIALTN TEHDKIYVEKPTENSMKFVEESINEFRYVVHKDRESIFKLMEIKVPTYKRKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 8e-83 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | NP_782812.1 | capD protein | VFG1300 | Protein | 1e-81 | 47 |
